Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC4.46□□□□□ -1.69
SCXQ7RTU7 TTC41P-205ENST00000551270 3963 ntBASIC4.46□□□□□ -1.69
SCXQ7RTU7 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SCXQ7RTU7 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC4.46□□□□□ -1.69
SCXQ7RTU7 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
SCXQ7RTU7 AC010401.2-201ENST00000575137 4934 ntBASIC4.46□□□□□ -1.69
SCXQ7RTU7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC067942.1-201ENST00000488045 1493 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 MIR191-201ENST00000384873 92 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 CNN3P1-201ENST00000401596 935 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AL079341.1-201ENST00000404701 1207 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 CHCHD3P1-201ENST00000425516 676 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 MYL6P3-201ENST00000436904 432 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 RPL12P49-201ENST00000441100 121 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 KF459542.1-201ENST00000450908 553 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AL096803.1-201ENST00000456921 1021 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 RN7SL836P-201ENST00000476140 296 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC117394.1-201ENST00000477323 567 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 MINOS1P4-201ENST00000515470 318 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 IGLC4-201ENST00000517690 248 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AP005902.2-201ENST00000518393 307 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 IGKV2D-38-201ENST00000518423 240 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AL132640.1-201ENST00000559594 619 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC096708.2-201ENST00000577676 512 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 MIR378C-201ENST00000578683 81 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 AL034374.2-201ENST00000605281 548 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AL355333.1-201ENST00000605632 279 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC063962.1-201ENST00000608199 521 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 MIR6885-201ENST00000612241 66 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 MRPL57P3-201ENST00000619218 176 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC211486.4-201ENST00000621495 113 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 KARSP2-201ENST00000415696 1639 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AL662795.2-201ENST00000624252 3706 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 AC061975.5-201ENST00000584928 1441 ntBASIC4.46□□□□□ -1.7
SCXQ7RTU7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCXQ7RTU7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.46□□□□□ -1.7
SCXQ7RTU7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 AL137058.3-201ENST00000624531 3099 ntBASIC4.45□□□□□ -1.7
SCXQ7RTU7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 AC095038.1-201ENST00000429248 1591 ntBASIC4.45□□□□□ -1.7
SCXQ7RTU7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.45□□□□□ -1.7
SCXQ7RTU7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SCXQ7RTU7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCXQ7RTU7 RN7SKP107-201ENST00000364157 290 ntBASIC4.45□□□□□ -1.7
SCXQ7RTU7 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms