Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DDX43P1-201ENST00000510713 1763 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 DDX10P2-201ENST00000417796 2614 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 AL078621.3-201ENST00000623707 2042 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 FGG-204ENST00000405164 1539 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 RNA5SP65-201ENST00000363166 119 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 OR4F7P-201ENST00000402444 931 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 OR4F1P-201ENST00000405102 938 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 RN7SKP89-201ENST00000410774 242 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 VN1R66P-201ENST00000412929 916 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 OR7E117P-201ENST00000422682 1112 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 PSMC1P2-201ENST00000423961 1204 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 OR4F2P-201ENST00000424047 938 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 RPSAP65-201ENST00000429660 595 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.69□□□□□ -1.66
CKS1BP61024 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 PSMD8P1-201ENST00000436275 769 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 RPS10P3-201ENST00000439253 494 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 RPSAP7-201ENST00000456871 885 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AC008026.1-201ENST00000460492 447 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 RN7SL791P-201ENST00000467868 295 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 RPL5P22-201ENST00000480199 884 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AC008040.4-201ENST00000494834 768 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 OR7E163P-201ENST00000505943 894 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 RPS23-208ENST00000512493 443 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 RNA5SP422-201ENST00000516778 111 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 AL355076.3-201ENST00000555838 587 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC4.69□□□□□ -1.66
CKS1BP61024 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 MIR4266-201ENST00000583300 55 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 AC138904.2-201ENST00000614412 107 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AC078909.2-201ENST00000620584 398 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 AC211433.3-201ENST00000623770 375 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 AC124944.3-204ENST00000641191 150 ntBASIC4.69□□□□□ -1.66
CKS1BP61024 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.69□□□□□ -1.66
CKS1BP61024 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.69□□□□□ -1.66
CKS1BP61024 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.69□□□□□ -1.66
CKS1BP61024 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CKS1BP61024 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CKS1BP61024 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC4.69□□□□□ -1.66
CKS1BP61024 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC063923.1-201ENST00000478982 1619 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 ASNSP6-201ENST00000592770 1618 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms