Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 WDR45BP1-201ENST00000583470 1029 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH13P55290 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AC005753.1-201ENST00000623837 618 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AC093909.6-201ENST00000624757 775 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH13P55290 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 AC020658.2-201ENST00000559030 4020 ntBASIC6.48□□□□□ -1.37
CDH13P55290 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 AC005332.9-201ENST00000620266 2921 ntBASIC6.48□□□□□ -1.37
CDH13P55290 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH13P55290 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CDH13P55290 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH13P55290 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CDH13P55290 API5P1-201ENST00000424316 1510 ntBASIC6.47□□□□□ -1.37
CDH13P55290 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 MIR301B-201ENST00000390813 78 ntBASIC6.47□□□□□ -1.37
CDH13P55290 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 RN7SKP296-201ENST00000411185 341 ntBASIC6.47□□□□□ -1.37
CDH13P55290 GRPEL2P2-201ENST00000421856 670 ntBASIC6.47□□□□□ -1.37
CDH13P55290 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH13P55290 RPL6P24-201ENST00000445338 864 ntBASIC6.47□□□□□ -1.37
CDH13P55290 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 RN7SL492P-201ENST00000460700 295 ntBASIC6.47□□□□□ -1.37
CDH13P55290 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH13P55290 AC092824.1-201ENST00000483524 576 ntBASIC6.47□□□□□ -1.37
CDH13P55290 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 OR51A1P-201ENST00000511110 946 ntBASIC6.47□□□□□ -1.37
CDH13P55290 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH13P55290 SNRPCP6-201ENST00000528310 210 ntBASIC6.47□□□□□ -1.37
CDH13P55290 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH13P55290 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AC091304.4-201ENST00000565703 620 ntBASIC6.47□□□□□ -1.37
CDH13P55290 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 RN7SL270P-201ENST00000579643 281 ntBASIC6.47□□□□□ -1.37
CDH13P55290 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.47□□□□□ -1.37
CDH13P55290 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH13P55290 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CDH13P55290 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.47□□□□□ -1.37
CDH13P55290 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH13P55290 AC009779.8-201ENST00000641684 4384 ntBASIC6.47□□□□□ -1.37
CDH13P55290 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH13P55290 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH13P55290 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CDH13P55290 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.46□□□□□ -1.37
CDH13P55290 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
CDH13P55290 AL731556.1-201ENST00000394628 3711 ntBASIC6.46□□□□□ -1.37
CDH13P55290 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH13P55290 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH13P55290 RN7SKP189-201ENST00000365042 330 ntBASIC6.46□□□□□ -1.38
CDH13P55290 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH13P55290 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
CDH13P55290 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH13P55290 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDH13P55290 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH13P55290 AL359694.1-201ENST00000403247 604 ntBASIC6.46□□□□□ -1.38
CDH13P55290 MTND4LP17-201ENST00000414607 293 ntBASIC6.46□□□□□ -1.38
CDH13P55290 OR52S1P-201ENST00000427016 937 ntBASIC6.46□□□□□ -1.38
CDH13P55290 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH13P55290 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDH13P55290 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDH13P55290 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH13P55290 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH13P55290 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH13P55290 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.46□□□□□ -1.38
CDH13P55290 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH13P55290 ENPP7P3-201ENST00000509123 241 ntBASIC6.46□□□□□ -1.38
CDH13P55290 AC091849.1-201ENST00000509920 121 ntBASIC6.46□□□□□ -1.38
CDH13P55290 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH13P55290 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH13P55290 AC026774.2-201ENST00000513990 1098 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms