Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 MIR4760-201ENST00000585040 80 ntBASIC6□□□□□ -1.45
SOX2P48431 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 AL683813.2-201ENST00000605245 502 ntBASIC6□□□□□ -1.45
SOX2P48431 OR1N1-202ENST00000619659 939 ntBASIC6□□□□□ -1.45
SOX2P48431 AL049777.1-201ENST00000622740 518 ntBASIC6□□□□□ -1.45
SOX2P48431 AC016542.3-201ENST00000623520 619 ntBASIC6□□□□□ -1.45
SOX2P48431 AC005355.2-201ENST00000625064 484 ntBASIC6□□□□□ -1.45
SOX2P48431 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX2P48431 AL391261.1-201ENST00000555712 1479 ntBASIC6□□□□□ -1.45
SOX2P48431 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 AC062029.1-202ENST00000606164 3651 ntBASIC6□□□□□ -1.45
SOX2P48431 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 WBP11P1-201ENST00000562560 1931 ntBASIC5.99□□□□□ -1.45
SOX2P48431 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
SOX2P48431 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SOX2P48431 OR2M1P-201ENST00000318104 951 ntBASIC5.99□□□□□ -1.45
SOX2P48431 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 RPL24P4-201ENST00000326586 421 ntBASIC5.99□□□□□ -1.45
SOX2P48431 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SOX2P48431 CCNB2P1-201ENST00000399411 1150 ntBASIC5.99□□□□□ -1.45
SOX2P48431 RN7SKP148-201ENST00000410179 275 ntBASIC5.99□□□□□ -1.45
SOX2P48431 RPS21P8-201ENST00000413365 247 ntBASIC5.99□□□□□ -1.45
SOX2P48431 MTND4LP21-201ENST00000415303 295 ntBASIC5.99□□□□□ -1.45
SOX2P48431 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX2P48431 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 AC073508.1-201ENST00000428866 656 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX2P48431 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX2P48431 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX2P48431 WBP1LP1-201ENST00000460451 896 ntBASIC5.99□□□□□ -1.45
SOX2P48431 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX2P48431 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX2P48431 RN7SL392P-201ENST00000473024 299 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 RN7SL382P-201ENST00000482631 282 ntBASIC5.99□□□□□ -1.45
SOX2P48431 RN7SL561P-201ENST00000488553 281 ntBASIC5.99□□□□□ -1.45
SOX2P48431 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX2P48431 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 RNU6-943P-201ENST00000516960 98 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX2P48431 AC087752.2-201ENST00000521219 281 ntBASIC5.99□□□□□ -1.45
SOX2P48431 NXPE2P1-201ENST00000543705 726 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC011611.6-201ENST00000547483 255 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX2P48431 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 AC015674.1-201ENST00000578482 267 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 AC007262.1-201ENST00000604099 321 ntBASIC5.99□□□□□ -1.45
SOX2P48431 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 AL139123.1-201ENST00000612008 430 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX2P48431 RN7SL820P-201ENST00000616437 299 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AL354718.1-201ENST00000619764 589 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC090772.4-201ENST00000623599 362 ntBASIC5.99□□□□□ -1.45
SOX2P48431 AC133485.6-201ENST00000624045 688 ntBASIC5.99□□□□□ -1.45
SOX2P48431 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX2P48431 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 AC025809.2-201ENST00000625085 1802 ntBASIC5.99□□□□□ -1.45
SOX2P48431 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 HSPA8P19-201ENST00000505359 1517 ntBASIC5.99□□□□□ -1.45
SOX2P48431 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX2P48431 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SOX2P48431 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 NPM1P31-201ENST00000399021 764 ntBASIC5.98□□□□□ -1.45
SOX2P48431 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 AC091492.1-201ENST00000419844 272 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms