Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHC1P29353 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 AC025809.2-201ENST00000625085 1802 ntBASIC6.07□□□□□ -1.44
SHC1P29353 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SHC1P29353 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHC1P29353 OR2M1P-201ENST00000318104 951 ntBASIC6.07□□□□□ -1.44
SHC1P29353 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.07□□□□□ -1.44
SHC1P29353 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHC1P29353 AL359694.1-201ENST00000403247 604 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AL353626.3-201ENST00000413399 657 ntBASIC6.07□□□□□ -1.44
SHC1P29353 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 RPS10P21-201ENST00000430654 475 ntBASIC6.07□□□□□ -1.44
SHC1P29353 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.07□□□□□ -1.44
SHC1P29353 CRYGGP-201ENST00000443337 145 ntBASIC6.07□□□□□ -1.44
SHC1P29353 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.07□□□□□ -1.44
SHC1P29353 PPIAP32-201ENST00000449940 472 ntBASIC6.07□□□□□ -1.44
SHC1P29353 RN7SL561P-201ENST00000488553 281 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.07□□□□□ -1.44
SHC1P29353 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AC131935.1-201ENST00000524621 333 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.07□□□□□ -1.44
SHC1P29353 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.07□□□□□ -1.44
SHC1P29353 HMGN1P26-201ENST00000558737 303 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AC091768.1-201ENST00000609258 930 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AP001885.1-201ENST00000621658 558 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AC127071.2-201ENST00000623293 527 ntBASIC6.07□□□□□ -1.44
SHC1P29353 AL033543.1-201ENST00000623440 13454 ntBASIC6.07□□□□□ -1.44
SHC1P29353 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.07□□□□□ -1.44
SHC1P29353 API5P1-201ENST00000424316 1510 ntBASIC6.07□□□□□ -1.44
SHC1P29353 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHC1P29353 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.07□□□□□ -1.44
SHC1P29353 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.06□□□□□ -1.44
SHC1P29353 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SHC1P29353 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHC1P29353 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHC1P29353 ARSFP1-201ENST00000398758 477 ntBASIC6.06□□□□□ -1.44
SHC1P29353 RPL12P23-201ENST00000405880 490 ntBASIC6.06□□□□□ -1.44
SHC1P29353 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.06□□□□□ -1.44
SHC1P29353 RPS21P8-201ENST00000413365 247 ntBASIC6.06□□□□□ -1.44
SHC1P29353 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 AC239367.3-201ENST00000428996 814 ntBASIC6.06□□□□□ -1.44
SHC1P29353 PSMD8P1-201ENST00000436275 769 ntBASIC6.06□□□□□ -1.44
SHC1P29353 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHC1P29353 RN7SKP198-201ENST00000459286 306 ntBASIC6.06□□□□□ -1.44
SHC1P29353 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 RN7SL267P-201ENST00000485107 261 ntBASIC6.06□□□□□ -1.44
SHC1P29353 RN7SL37P-201ENST00000490461 307 ntBASIC6.06□□□□□ -1.44
SHC1P29353 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.06□□□□□ -1.44
SHC1P29353 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 AC091849.1-201ENST00000509920 121 ntBASIC6.06□□□□□ -1.44
SHC1P29353 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.06□□□□□ -1.44
SHC1P29353 AC122713.1-201ENST00000518368 1015 ntBASIC6.06□□□□□ -1.44
SHC1P29353 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.06□□□□□ -1.44
SHC1P29353 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.06□□□□□ -1.44
SHC1P29353 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.06□□□□□ -1.44
SHC1P29353 OR4A13P-201ENST00000529316 942 ntBASIC6.06□□□□□ -1.44
SHC1P29353 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms