Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 RNA5SP301-201ENST00000362537 121 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AL451061.1-201ENST00000407887 862 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 FTOP1-201ENST00000419363 861 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 GAPDHP55-201ENST00000423136 803 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 RPL12P16-201ENST00000431098 498 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 ARMC8P1-201ENST00000443069 1289 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 ATP5G1P6-201ENST00000451206 412 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC013429.1-201ENST00000456604 422 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 MRPL57P6-201ENST00000506570 309 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 OR51A1P-201ENST00000511110 946 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 LDHBP3-201ENST00000514909 822 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC079866.1-201ENST00000534985 1220 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AP000619.2-201ENST00000546014 969 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 OR4H6P-201ENST00000563771 921 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 NDUFA3P1-201ENST00000588007 252 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 OR7E94P-202ENST00000601375 790 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC026333.4-201ENST00000613543 544 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AL355480.4-201ENST00000626823 69 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC135068.11-201ENST00000636378 921 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AC000095.2-202ENST00000637415 154 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AL355488.2-201ENST00000609909 2850 ntBASIC4.94□□□□□ -1.62
HLA-DQA1P01909 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC231533.2-201ENST00000419045 978 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL591379.2-201ENST00000450223 397 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 TCEAL4P1-201ENST00000453620 588 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 RPL7L1P3-201ENST00000455249 689 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL445687.2-201ENST00000458156 728 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 SNX18P26-201ENST00000458433 740 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 RPL23AP68-201ENST00000480924 445 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC008677.3-201ENST00000519146 666 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ACER3-213ENST00000533873 929 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL049869.4-201ENST00000555669 178 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC090651.1-201ENST00000567865 634 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC106785.4-201ENST00000569492 412 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms