Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX18Q96RF0 AL391834.2-201ENST00000609982 546 ntBASIC6.39□□□□□ -1.39
SNX18Q96RF0 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.39□□□□□ -1.39
SNX18Q96RF0 AC009032.1-201ENST00000617574 431 ntBASIC6.39□□□□□ -1.39
SNX18Q96RF0 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX18Q96RF0 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.39□□□□□ -1.39
SNX18Q96RF0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 AC089998.1-201ENST00000548575 3141 ntBASIC6.39□□□□□ -1.39
SNX18Q96RF0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.39□□□□□ -1.39
SNX18Q96RF0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SNX18Q96RF0 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.39□□□□□ -1.39
SNX18Q96RF0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNX18Q96RF0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AL022323.4-201ENST00000623980 13120 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 RNA5SP333-201ENST00000363466 118 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 RNA5SP334-201ENST00000364825 118 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 RPL12P1-201ENST00000374520 498 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 SNORA70.8-201ENST00000384231 136 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 UBE2V1P15-201ENST00000407776 448 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 DUTP4-201ENST00000424782 475 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 RPSAP7-201ENST00000456871 885 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 RN7SL791P-201ENST00000467868 295 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC018639.1-201ENST00000492994 442 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 HAUS1P1-201ENST00000505275 832 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 IGKV1D-32-201ENST00000517449 318 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC012414.2-201ENST00000559474 187 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC024451.4-201ENST00000602578 752 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AP001554.1-201ENST00000604533 376 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC135803.1-201ENST00000608748 565 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 FRG2MP-201ENST00000613317 856 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 BNIP3P41-202ENST00000616656 861 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC022960.3-201ENST00000619794 441 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC034229.6-201ENST00000623704 224 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AP001157.1-201ENST00000550837 2339 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX18Q96RF0 AL033543.1-201ENST00000623440 13454 ntBASIC6.38□□□□□ -1.39
SNX18Q96RF0 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 AC005618.1-201ENST00000606901 3148 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 MTND4P9-201ENST00000507819 1346 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX18Q96RF0 SNORA72.3-201ENST00000365074 132 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 MIR620-201ENST00000385232 95 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 RN7SKP30-201ENST00000411373 334 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 TAS2R2P-201ENST00000421146 910 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 FDPSP6-201ENST00000425091 512 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 AL138479.1-201ENST00000426913 484 ntBASIC6.37□□□□□ -1.39
SNX18Q96RF0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX18Q96RF0 RNF2P1-201ENST00000442955 1010 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms