Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CDH13P55290 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH13P55290 MKI67P1-201ENST00000604297 1460 ntBASIC6.49□□□□□ -1.37
CDH13P55290 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDH13P55290 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 SOD1P1-201ENST00000407803 440 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC017035.1-201ENST00000411999 1115 ntBASIC6.49□□□□□ -1.37
CDH13P55290 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 RPS7P12-201ENST00000422385 582 ntBASIC6.49□□□□□ -1.37
CDH13P55290 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 AL354893.1-201ENST00000433735 348 ntBASIC6.49□□□□□ -1.37
CDH13P55290 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.49□□□□□ -1.37
CDH13P55290 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 AC114755.1-201ENST00000453101 868 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 RPS4XP19-201ENST00000460237 736 ntBASIC6.49□□□□□ -1.37
CDH13P55290 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 RN7SL390P-201ENST00000470634 284 ntBASIC6.49□□□□□ -1.37
CDH13P55290 MTCO1P55-201ENST00000489829 745 ntBASIC6.49□□□□□ -1.37
CDH13P55290 MTND6P8-201ENST00000503471 522 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC010409.2-201ENST00000505780 478 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC083906.1-201ENST00000509298 406 ntBASIC6.49□□□□□ -1.37
CDH13P55290 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH13P55290 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH13P55290 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 FAM30C-201ENST00000561158 410 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC106785.4-201ENST00000569492 412 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH13P55290 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 AL157899.1-201ENST00000604110 936 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC097467.4-201ENST00000605504 141 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC006328.2-201ENST00000623198 397 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC012005.2-201ENST00000624333 397 ntBASIC6.49□□□□□ -1.37
CDH13P55290 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH13P55290 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH13P55290 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH13P55290 QRSL1P3-201ENST00000552666 1316 ntBASIC6.49□□□□□ -1.37
CDH13P55290 AC105749.1-201ENST00000631338 2008 ntBASIC6.49□□□□□ -1.37
CDH13P55290 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH13P55290 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 RNU1-46P-201ENST00000384425 164 ntBASIC6.48□□□□□ -1.37
CDH13P55290 MIR99A-201ENST00000384906 81 ntBASIC6.48□□□□□ -1.37
CDH13P55290 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH13P55290 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH13P55290 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH13P55290 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 OSTCP2-201ENST00000437956 444 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH13P55290 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH13P55290 PFN1P11-201ENST00000445829 389 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH13P55290 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH13P55290 RPL7AP23-201ENST00000482625 776 ntBASIC6.48□□□□□ -1.37
CDH13P55290 AC025271.1-201ENST00000485045 429 ntBASIC6.48□□□□□ -1.37
CDH13P55290 NPM1P27-201ENST00000502784 830 ntBASIC6.48□□□□□ -1.37
CDH13P55290 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.48□□□□□ -1.37
CDH13P55290 PSMC1P8-201ENST00000536820 1296 ntBASIC6.48□□□□□ -1.37
CDH13P55290 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH13P55290 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms