Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MTND3P20-201ENST00000407663 186 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 RNU6-564P-201ENST00000410983 104 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 RAB9AP4-201ENST00000415230 609 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AL593856.1-201ENST00000419949 805 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 TAS2R2P-201ENST00000421146 910 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 RCC2P2-201ENST00000422174 918 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AC007064.3-201ENST00000422608 359 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 FAM204CP-201ENST00000424489 642 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 AF274573.1-201ENST00000430535 494 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AC105052.2-201ENST00000434317 794 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 TVP23CP1-201ENST00000450317 639 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 NDUFB4P1-201ENST00000462398 381 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AC105391.1-201ENST00000503155 1045 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 SNX18P27-201ENST00000523611 779 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC092375.1-201ENST00000550410 637 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 MIR1273F-201ENST00000580581 99 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.56□□□□□ -1.36
NR1H2P55055 AC024085.1-201ENST00000604299 432 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 AP002370.1-201ENST00000528055 1602 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AP005139.1-201ENST00000580702 1647 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.56□□□□□ -1.36
NR1H2P55055 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.56□□□□□ -1.36
NR1H2P55055 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NR1H2P55055 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.55□□□□□ -1.36
NR1H2P55055 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NR1H2P55055 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.55□□□□□ -1.36
NR1H2P55055 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 MTCO1P25-201ENST00000414449 1799 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NR1H2P55055 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NR1H2P55055 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 NUS1P4-201ENST00000401550 585 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL139135.1-201ENST00000412675 209 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 PA2G4P1-201ENST00000442248 1197 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL451063.1-201ENST00000450164 1133 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 AC018892.2-201ENST00000457656 693 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 CTSLP6-201ENST00000458273 1002 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 RN7SL776P-201ENST00000493390 268 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 OR7E10P-201ENST00000526420 991 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 KCTD9P4-201ENST00000526766 1166 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 OR5F2P-201ENST00000532761 941 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.55□□□□□ -1.36
NR1H2P55055 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.55□□□□□ -1.36
NR1H2P55055 UBE2CP4-201ENST00000561405 535 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.55□□□□□ -1.36
NR1H2P55055 AC023389.2-201ENST00000580031 955 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 GTF2IP6-201ENST00000583143 541 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms