Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
NEK3P51956 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
NEK3P51956 FAM204BP-201ENST00000369171 701 ntBASIC7.16□□□□□ -1.26
NEK3P51956 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 PDCL3P5-201ENST00000398028 722 ntBASIC7.16□□□□□ -1.26
NEK3P51956 RNA5SP280-201ENST00000411230 115 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AL356968.2-201ENST00000412769 1257 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.16□□□□□ -1.26
NEK3P51956 GAPDHP69-201ENST00000425504 1008 ntBASIC7.16□□□□□ -1.26
NEK3P51956 PUDPP2-201ENST00000431423 643 ntBASIC7.16□□□□□ -1.26
NEK3P51956 BX005266.3-201ENST00000443013 1075 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC011742.2-201ENST00000443818 352 ntBASIC7.16□□□□□ -1.26
NEK3P51956 RAB28P3-201ENST00000448325 597 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC009244.1-201ENST00000450566 258 ntBASIC7.16□□□□□ -1.26
NEK3P51956 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 MED28P7-201ENST00000456611 530 ntBASIC7.16□□□□□ -1.26
NEK3P51956 GAPDHP53-201ENST00000458397 924 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.16□□□□□ -1.26
NEK3P51956 RN7SL259P-201ENST00000478499 253 ntBASIC7.16□□□□□ -1.26
NEK3P51956 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.16□□□□□ -1.26
NEK3P51956 RN7SL797P-201ENST00000486314 297 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.16□□□□□ -1.26
NEK3P51956 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.16□□□□□ -1.26
NEK3P51956 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 PHBP2-201ENST00000532859 806 ntBASIC7.16□□□□□ -1.26
NEK3P51956 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.16□□□□□ -1.26
NEK3P51956 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 MIR5682-201ENST00000584864 76 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC012065.3-201ENST00000602736 439 ntBASIC7.16□□□□□ -1.26
NEK3P51956 CYCSP1-201ENST00000604815 315 ntBASIC7.16□□□□□ -1.26
NEK3P51956 MIR6070-201ENST00000613967 103 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AL161420.1-201ENST00000619393 264 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NEK3P51956 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.16□□□□□ -1.26
NEK3P51956 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 ASNSP6-201ENST00000592770 1618 ntBASIC7.16□□□□□ -1.26
NEK3P51956 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEK3P51956 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.15□□□□□ -1.26
NEK3P51956 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.15□□□□□ -1.26
NEK3P51956 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 PABPC1P8-201ENST00000452851 2086 ntBASIC7.15□□□□□ -1.26
NEK3P51956 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 AC006511.2-201ENST00000388966 660 ntBASIC7.15□□□□□ -1.26
NEK3P51956 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
NEK3P51956 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NEK3P51956 CXADRP1-201ENST00000398098 1095 ntBASIC7.15□□□□□ -1.26
NEK3P51956 EEF1GP6-201ENST00000402309 905 ntBASIC7.15□□□□□ -1.26
NEK3P51956 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
NEK3P51956 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.15□□□□□ -1.26
NEK3P51956 RN7SKP254-201ENST00000410685 310 ntBASIC7.15□□□□□ -1.26
NEK3P51956 RN7SKP268-201ENST00000411107 316 ntBASIC7.15□□□□□ -1.26
NEK3P51956 YWHAZP5-201ENST00000419975 730 ntBASIC7.15□□□□□ -1.26
NEK3P51956 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.15□□□□□ -1.26
NEK3P51956 AC114402.2-201ENST00000432760 643 ntBASIC7.15□□□□□ -1.26
NEK3P51956 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.15□□□□□ -1.26
NEK3P51956 ARL5AP3-201ENST00000439327 386 ntBASIC7.15□□□□□ -1.26
NEK3P51956 AL606490.8-201ENST00000441624 319 ntBASIC7.15□□□□□ -1.26
NEK3P51956 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.15□□□□□ -1.26
NEK3P51956 OR7E7P-201ENST00000455678 1012 ntBASIC7.15□□□□□ -1.26
NEK3P51956 SNORA81.1-201ENST00000458922 177 ntBASIC7.15□□□□□ -1.26
NEK3P51956 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.15□□□□□ -1.26
NEK3P51956 AC023818.1-201ENST00000498379 384 ntBASIC7.15□□□□□ -1.26
NEK3P51956 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.15□□□□□ -1.26
NEK3P51956 DCAF13P2-201ENST00000514188 555 ntBASIC7.15□□□□□ -1.26
NEK3P51956 AC096661.1-201ENST00000515870 822 ntBASIC7.15□□□□□ -1.26
NEK3P51956 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.15□□□□□ -1.26
NEK3P51956 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC7.15□□□□□ -1.26
NEK3P51956 OR7E154P-201ENST00000525174 932 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms