Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AL391666.1-201ENST00000442570 2764 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AC009148.1-201ENST00000570148 2693 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC110926.1-201ENST00000412499 2825 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RNF144AP50876 LINC00294-201ENST00000631190 3306 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RNF144AP50876 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RNF144AP50876 MIR425-201ENST00000362162 87 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 Y_RNA.263-201ENST00000364659 114 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AL391422.1-201ENST00000402155 436 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 ANXA2P3-201ENST00000404883 1008 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 MTND4LP10-201ENST00000435146 291 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF144AP50876 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC093019.1-201ENST00000443135 252 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC010099.2-201ENST00000443177 373 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AL772284.1-201ENST00000443421 905 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 RAB28P3-201ENST00000448325 597 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC092634.4-203ENST00000451395 448 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AL391825.1-202ENST00000458136 741 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 RN7SL757P-201ENST00000466709 301 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC013828.1-201ENST00000481845 158 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AC025459.1-201ENST00000504072 156 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC079395.1-201ENST00000510981 262 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC083906.4-201ENST00000514634 987 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 OR5AK1P-201ENST00000524837 922 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC005726.4-201ENST00000582858 458 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC067796.1-201ENST00000586795 496 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 RPL7L1P5-201ENST00000590816 738 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AP001542.2-201ENST00000593141 364 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AL691432.1-202ENST00000597891 502 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC233702.11-201ENST00000598588 333 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC012557.1-201ENST00000607115 611 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AL121928.1-201ENST00000608017 521 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 Y_RNA.812-201ENST00000610788 101 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 Y_RNA.784-201ENST00000613803 101 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 Y_RNA.787-201ENST00000616522 101 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 Y_RNA.780-201ENST00000617336 101 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 Y_RNA.801-201ENST00000619005 101 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 AC069542.2-201ENST00000624816 216 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AC131392.2-201ENST00000505635 4332 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF144AP50876 AL391380.1-201ENST00000439300 1432 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
RNF144AP50876 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.83□□□□□ -1.16
RNF144AP50876 NEPNP-201ENST00000404786 1371 ntBASIC7.83□□□□□ -1.16
RNF144AP50876 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF144AP50876 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF144AP50876 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms