Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 AL121578.1-201ENST00000428051 892 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 AC245452.2-201ENST00000435222 392 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 PNKDP1-201ENST00000435914 430 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.35□□□□□ -1.07
COL15A1P39059 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 CXCR2P1-202ENST00000443392 1074 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 CEACAMP5-201ENST00000448037 961 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 RN7SL705P-201ENST00000481678 294 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 AC095057.1-201ENST00000507583 168 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 AC108103.1-201ENST00000511286 446 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 AC090115.2-201ENST00000548060 883 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 AC023968.1-201ENST00000560719 475 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.35□□□□□ -1.07
COL15A1P39059 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.35□□□□□ -1.07
COL15A1P39059 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
COL15A1P39059 AC096537.2-201ENST00000413707 714 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 HSPE1P27-201ENST00000430808 296 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.35□□□□□ -1.07
COL15A1P39059 RPL5P14-201ENST00000494197 878 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.35□□□□□ -1.07
COL15A1P39059 AC090826.1-203ENST00000569235 490 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.35□□□□□ -1.07
COL15A1P39059 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.35□□□□□ -1.07
COL15A1P39059 AC010333.3-201ENST00000615100 402 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
COL15A1P39059 AP005139.1-201ENST00000580702 1647 ntBASIC8.35□□□□□ -1.07
COL15A1P39059 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.34□□□□□ -1.07
COL15A1P39059 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.34□□□□□ -1.07
COL15A1P39059 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
COL15A1P39059 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
COL15A1P39059 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 AC122713.2-201ENST00000624942 3335 ntBASIC8.34□□□□□ -1.07
COL15A1P39059 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
COL15A1P39059 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.34□□□□□ -1.07
COL15A1P39059 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
COL15A1P39059 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.34□□□□□ -1.07
COL15A1P39059 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.34□□□□□ -1.07
COL15A1P39059 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
COL15A1P39059 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.34□□□□□ -1.07
COL15A1P39059 AL139805.1-201ENST00000407837 289 ntBASIC8.34□□□□□ -1.07
COL15A1P39059 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.34□□□□□ -1.07
COL15A1P39059 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.34□□□□□ -1.07
COL15A1P39059 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.34□□□□□ -1.07
COL15A1P39059 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
COL15A1P39059 AC092375.1-201ENST00000550410 637 ntBASIC8.34□□□□□ -1.07
COL15A1P39059 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.34□□□□□ -1.07
COL15A1P39059 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.34□□□□□ -1.07
COL15A1P39059 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.34□□□□□ -1.07
COL15A1P39059 AC067773.1-201ENST00000603284 1094 ntBASIC8.34□□□□□ -1.07
COL15A1P39059 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.34□□□□□ -1.07
COL15A1P39059 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
COL15A1P39059 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.34□□□□□ -1.08
COL15A1P39059 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.33□□□□□ -1.08
COL15A1P39059 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.33□□□□□ -1.08
COL15A1P39059 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
COL15A1P39059 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
COL15A1P39059 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
COL15A1P39059 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
COL15A1P39059 AC138915.4-201ENST00000565549 4147 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms