Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC090602.1-201ENST00000469695 252 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 RN7SL379P-201ENST00000479912 293 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 RN7SL187P-201ENST00000495587 303 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 HNRNPA1P17-201ENST00000496620 924 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AP006587.2-201ENST00000530696 493 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC023389.2-201ENST00000580031 955 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC020914.7-201ENST00000594477 545 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC005070.1-201ENST00000603744 365 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 FAM74A6-203ENST00000615956 481 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC016542.3-201ENST00000623520 619 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC073488.7-201ENST00000633785 778 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AL161912.4-201ENST00000623889 2468 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC022613.3-201ENST00000560740 1346 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC092451.3-201ENST00000625067 1343 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 MTCO1P25-201ENST00000414449 1799 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 SHQ1P1-201ENST00000437111 1544 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 SNORA51.7-201ENST00000384171 134 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 EIF4A1P13-201ENST00000415667 230 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 CCNJP2-201ENST00000457810 1163 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 WBP1LP1-201ENST00000460451 896 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 RPSAP24-201ENST00000461543 873 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 RN7SL508P-201ENST00000464472 303 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 RN7SL849P-201ENST00000485236 295 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 GGTA1P-204ENST00000488429 1104 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 NPM1P27-201ENST00000502784 830 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC106774.2-201ENST00000510266 406 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 RNA5SP422-201ENST00000516778 111 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AP003499.1-201ENST00000527217 574 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 OR4A40P-201ENST00000533878 948 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL031846.1-201ENST00000560933 314 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC133569.1-201ENST00000564327 373 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC007255.2-201ENST00000604053 631 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL359263.1-201ENST00000441188 2796 ntBASIC5.69□□□□□ -1.5
HLA-DMAP28067 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DMAP28067 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DMAP28067 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 MTND5P12-201ENST00000502851 1449 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AL359715.1-201ENST00000404330 555 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 AL451061.1-201ENST00000407887 862 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 CHCHD3P1-201ENST00000425516 676 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 HSPE1P27-201ENST00000430808 296 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AP006193.1-201ENST00000440724 485 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 TCEAL4P1-201ENST00000453620 588 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms