Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 RNU1-46P-201ENST00000384425 164 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CXCL1P09341 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CXCL1P09341 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 PEX12P1-201ENST00000400284 1048 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 AC103563.5-201ENST00000455643 364 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 AL022319.1-201ENST00000458183 1167 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 RN7SL688P-201ENST00000471754 275 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 IGLVV-66-201ENST00000523818 341 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 AP006587.2-201ENST00000530696 493 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC090651.1-201ENST00000567865 634 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC005070.1-201ENST00000603744 365 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 AL109936.2-201ENST00000605350 650 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 RN7SL760P-201ENST00000607344 270 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 AC073488.7-201ENST00000633785 778 ntBASIC5.04□□□□□ -1.6
CXCL1P09341 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL1P09341 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL1P09341 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL1P09341 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL1P09341 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.03□□□□□ -1.6
CXCL1P09341 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 AC027279.4-201ENST00000624371 2072 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
CXCL1P09341 RNA5SP453-201ENST00000362503 119 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.03□□□□□ -1.6
CXCL1P09341 PPIAP26-201ENST00000377951 522 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 HNRNPCP2-201ENST00000399515 881 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AL121977.1-201ENST00000401636 979 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AL359715.1-201ENST00000404330 555 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AL023284.3-201ENST00000407767 334 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 VDAC1P10-201ENST00000416715 891 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 AC083855.1-201ENST00000440041 258 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AC108039.2-201ENST00000440214 359 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 RPL7AP30-201ENST00000482859 796 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 RN7SL519P-201ENST00000497925 288 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms