Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
TPM3P06753 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 AP000432.2-201ENST00000624164 2048 ntBASIC7.39□□□□□ -1.23
TPM3P06753 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM3P06753 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 RNA5SP53-201ENST00000391299 120 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AL157698.1-201ENST00000415190 1011 ntBASIC7.38□□□□□ -1.23
TPM3P06753 PAICSP2-201ENST00000429118 1150 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM3P06753 FTLP17-201ENST00000432567 525 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM3P06753 RN7SL815P-201ENST00000470970 290 ntBASIC7.38□□□□□ -1.23
TPM3P06753 RPS26P6-201ENST00000475156 348 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AC021146.11-201ENST00000503319 491 ntBASIC7.38□□□□□ -1.23
TPM3P06753 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM3P06753 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM3P06753 AC073916.1-201ENST00000545095 130 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM3P06753 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.38□□□□□ -1.23
TPM3P06753 RN7SL25P-201ENST00000583862 260 ntBASIC7.38□□□□□ -1.23
TPM3P06753 BOLA2P1-201ENST00000584794 232 ntBASIC7.38□□□□□ -1.23
TPM3P06753 SNRPCP20-201ENST00000588011 210 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM3P06753 AC011447.2-201ENST00000592921 283 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM3P06753 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.38□□□□□ -1.23
TPM3P06753 AL031658.2-201ENST00000616850 651 ntBASIC7.38□□□□□ -1.23
TPM3P06753 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM3P06753 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM3P06753 OR5AU1-204ENST00000641822 1197 ntBASIC7.38□□□□□ -1.23
TPM3P06753 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM3P06753 AC105235.1-201ENST00000623208 1816 ntBASIC7.38□□□□□ -1.23
TPM3P06753 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
TPM3P06753 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM3P06753 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM3P06753 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 AC011815.2-201ENST00000618230 2021 ntBASIC7.37□□□□□ -1.23
TPM3P06753 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 RACGAP1P-201ENST00000550663 1879 ntBASIC7.37□□□□□ -1.23
TPM3P06753 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM3P06753 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM3P06753 AC093107.1-201ENST00000422772 609 ntBASIC7.37□□□□□ -1.23
TPM3P06753 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.37□□□□□ -1.23
TPM3P06753 GAPDHP69-201ENST00000425504 1008 ntBASIC7.37□□□□□ -1.23
TPM3P06753 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 CCNJP2-201ENST00000457810 1163 ntBASIC7.37□□□□□ -1.23
TPM3P06753 GAPDHP53-201ENST00000458397 924 ntBASIC7.37□□□□□ -1.23
TPM3P06753 RPL7AP56-201ENST00000476420 791 ntBASIC7.37□□□□□ -1.23
TPM3P06753 RN7SL182P-201ENST00000496499 300 ntBASIC7.37□□□□□ -1.23
TPM3P06753 IGLC4-201ENST00000517690 248 ntBASIC7.37□□□□□ -1.23
TPM3P06753 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.37□□□□□ -1.23
TPM3P06753 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 OR5M4P-201ENST00000529436 925 ntBASIC7.37□□□□□ -1.23
TPM3P06753 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM3P06753 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM3P06753 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 AC023310.2-201ENST00000553844 547 ntBASIC7.37□□□□□ -1.23
TPM3P06753 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM3P06753 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
TPM3P06753 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 AC016590.3-201ENST00000611171 753 ntBASIC7.37□□□□□ -1.23
TPM3P06753 AL031777.2-201ENST00000611953 196 ntBASIC7.37□□□□□ -1.23
TPM3P06753 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
TPM3P06753 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TPM3P06753 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TPM3P06753 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM3P06753 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM3P06753 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
TPM3P06753 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
TPM3P06753 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM3P06753 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM3P06753 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
TPM3P06753 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
TPM3P06753 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM3P06753 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM3P06753 TYMSP1-201ENST00000407851 869 ntBASIC7.36□□□□□ -1.23
TPM3P06753 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.36□□□□□ -1.23
TPM3P06753 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.36□□□□□ -1.23
TPM3P06753 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms