Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.01□□□□□ -1.29
APOEP02649 AC089998.1-201ENST00000548575 3141 ntBASIC7.01□□□□□ -1.29
APOEP02649 AL161901.1-201ENST00000624954 3425 ntBASIC7.01□□□□□ -1.29
APOEP02649 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 CDY10P-201ENST00000452415 1567 ntBASIC7.01□□□□□ -1.29
APOEP02649 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
APOEP02649 AC019178.1-201ENST00000392337 440 ntBASIC7.01□□□□□ -1.29
APOEP02649 AL353133.1-201ENST00000407695 401 ntBASIC7.01□□□□□ -1.29
APOEP02649 MIR1266-201ENST00000408125 84 ntBASIC7.01□□□□□ -1.29
APOEP02649 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
APOEP02649 AC083855.1-201ENST00000440041 258 ntBASIC7.01□□□□□ -1.29
APOEP02649 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.01□□□□□ -1.29
APOEP02649 RN7SL37P-201ENST00000490461 307 ntBASIC7.01□□□□□ -1.29
APOEP02649 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.01□□□□□ -1.29
APOEP02649 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.01□□□□□ -1.29
APOEP02649 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.01□□□□□ -1.29
APOEP02649 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.01□□□□□ -1.29
APOEP02649 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.01□□□□□ -1.29
APOEP02649 AC092375.1-201ENST00000550410 637 ntBASIC7.01□□□□□ -1.29
APOEP02649 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.01□□□□□ -1.29
APOEP02649 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 AC010333.3-201ENST00000615100 402 ntBASIC7.01□□□□□ -1.29
APOEP02649 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 AC027559.1-201ENST00000636288 271 ntBASIC7.01□□□□□ -1.29
APOEP02649 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
APOEP02649 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.01□□□□□ -1.29
APOEP02649 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.01□□□□□ -1.29
APOEP02649 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
APOEP02649 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 ZNF402P-201ENST00000404435 3100 ntBASIC7.01□□□□□ -1.29
APOEP02649 NEK2P4-201ENST00000425793 1329 ntBASIC7.01□□□□□ -1.29
APOEP02649 AL512310.3-201ENST00000547023 1335 ntBASIC7.01□□□□□ -1.29
APOEP02649 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 AP000547.3-204ENST00000588548 2523 ntBASIC7□□□□□ -1.29
APOEP02649 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
APOEP02649 SNORA70.3-201ENST00000365075 132 ntBASIC7□□□□□ -1.29
APOEP02649 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 AC006509.1-201ENST00000420788 634 ntBASIC7□□□□□ -1.29
APOEP02649 SPATA20P1-201ENST00000423089 438 ntBASIC7□□□□□ -1.29
APOEP02649 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 WDR82P2-201ENST00000444540 928 ntBASIC7□□□□□ -1.29
APOEP02649 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 AC023818.1-201ENST00000498379 384 ntBASIC7□□□□□ -1.29
APOEP02649 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 NREP-217ENST00000509025 987 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 NREP-223ENST00000515855 801 ntTSL 4 BASIC7□□□□□ -1.29
APOEP02649 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 AC007068.2-201ENST00000543168 395 ntBASIC7□□□□□ -1.29
APOEP02649 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7□□□□□ -1.29
APOEP02649 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 AC036176.3-201ENST00000602456 418 ntBASIC7□□□□□ -1.29
APOEP02649 AL513218.1-201ENST00000606527 391 ntBASIC7□□□□□ -1.29
APOEP02649 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7□□□□□ -1.29
APOEP02649 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 CLUHP10-201ENST00000631979 980 ntBASIC7□□□□□ -1.29
APOEP02649 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms