Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC106785.4-201ENST00000569492 412 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 MRPL45P2-203ENST00000573318 473 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 MIR4470-201ENST00000583453 72 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 MIR4642-201ENST00000583943 82 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 OR5AH1P-201ENST00000595968 283 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC243830.3-201ENST00000616810 376 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AP005212.3-201ENST00000619964 528 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC106795.5-201ENST00000623288 454 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC135068.11-201ENST00000636378 921 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AL451064.2-201ENST00000623514 1654 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 PCNAP3-201ENST00000397222 778 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC113608.1-201ENST00000398740 305 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 RN7SKP148-201ENST00000410179 275 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NME1P1-201ENST00000420914 382 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AL590399.2-201ENST00000427536 309 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC130472.1-201ENST00000427885 309 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 RPL12P16-201ENST00000431098 498 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC010878.1-201ENST00000456500 1047 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AL445687.2-201ENST00000458156 728 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC022730.2-201ENST00000465359 452 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC109454.1-201ENST00000471205 498 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC008040.4-201ENST00000494834 768 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NDUFA3P4-201ENST00000560814 250 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC090651.1-201ENST00000567865 634 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AL157762.1-201ENST00000619612 415 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC005790.1-201ENST00000619774 450 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC078909.2-201ENST00000620584 398 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC009120.7-201ENST00000623452 780 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 AC211433.3-201ENST00000623770 375 ntBASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RBFOX3A6NFN3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 CDY19P-201ENST00000411668 1613 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms