Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC023389.2-201ENST00000580031 955 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC025287.2-201ENST00000621911 668 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC093909.6-201ENST00000624757 775 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC025809.2-201ENST00000625085 1802 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC140479.2-201ENST00000421567 3130 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC020658.2-201ENST00000559030 4020 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 RNA5SP333-201ENST00000363466 118 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 RNA5SP334-201ENST00000364825 118 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 PPIAP26-201ENST00000377951 522 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 FDPSP6-201ENST00000425091 512 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 FECHP1-201ENST00000431896 1214 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC114402.2-201ENST00000432760 643 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AL929410.2-201ENST00000451170 189 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AL096803.1-201ENST00000456921 1021 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SL187P-201ENST00000495587 303 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 KCTD9P4-201ENST00000526766 1166 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 HNRNPCP8-201ENST00000528764 888 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 MIR4800-201ENST00000537353 80 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC091304.5-201ENST00000568969 158 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC067852.5-201ENST00000589299 310 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AL953862.2-201ENST00000603089 820 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 OLMALINC-203ENST00000641087 3779 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 AC010401.2-201ENST00000575137 4934 ntBASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDD3Q9Y3P4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 SEPT7P2-202ENST00000398921 823 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms