Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 RPSAP60-201ENST00000415403 880 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AL672212.1-201ENST00000422246 400 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 PSMD8P1-201ENST00000436275 769 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 UOX-201ENST00000471089 899 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 RN7SL790P-201ENST00000474043 298 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC096754.1-201ENST00000508904 818 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC092375.1-201ENST00000550410 637 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 CHEK2P2-201ENST00000554701 672 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 MIR378C-201ENST00000578683 81 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 RN7SL199P-201ENST00000578752 281 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 RN7SL656P-201ENST00000579044 281 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 RN7SL404P-201ENST00000582421 281 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 WDR45BP1-201ENST00000583470 1029 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC087468.1-201ENST00000604365 630 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC048341.3-201ENST00000619323 491 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC006213.5-201ENST00000619673 288 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC005899.6-201ENST00000620729 297 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC135068.11-201ENST00000636378 921 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 TATDN2P3-201ENST00000452855 3665 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC007993.1-201ENST00000621298 2430 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC079248.1-201ENST00000427568 1546 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC127070.3-201ENST00000503695 3263 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 RNU1-56P-201ENST00000391303 164 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AL359715.1-201ENST00000404330 555 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 CHCHD4P5-201ENST00000436684 427 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 BMS1P11-201ENST00000442351 885 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 NDUFA5P8-201ENST00000449019 346 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 BMS1P9-201ENST00000457640 885 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 PPIAP6-201ENST00000557078 499 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC067805.1-201ENST00000559344 470 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC009303.3-201ENST00000591103 736 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 RPS27AP19-201ENST00000597285 458 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AP002345.2-201ENST00000609961 904 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC131009.3-201ENST00000621809 287 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AC010329.1-201ENST00000593903 8328 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 AL359195.2-201ENST00000623657 4412 ntBASIC8.19□□□□□ -1.1
CHMP4CQ96CF2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 ASNSP6-201ENST00000592770 1618 ntBASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 SNRPEP5-201ENST00000425442 278 ntBASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 LSM3P3-201ENST00000436601 306 ntBASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 BTBD7P2-201ENST00000441962 620 ntBASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AC117395.1-201ENST00000487390 403 ntBASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 MORF4L2P1-201ENST00000503761 858 ntBASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC8.18□□□□□ -1.1
CHMP4CQ96CF2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms