Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 RNA5SP474-201ENST00000391234 90 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 RN7SKP232-201ENST00000410170 290 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 SNRPBP1-201ENST00000443634 282 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC097359.1-201ENST00000447946 463 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC068491.1-201ENST00000449539 1241 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC005017.1-201ENST00000482002 490 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC113367.2-201ENST00000505749 160 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 SNRPCP6-201ENST00000528310 210 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC005363.1-201ENST00000530779 351 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 OR4A21P-201ENST00000532759 944 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC007068.2-201ENST00000543168 395 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC111186.1-201ENST00000604684 130 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC130448.2-201ENST00000624082 374 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC069542.2-201ENST00000624816 216 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC183089.2-201ENST00000637931 916 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 CASC19-212ENST00000641153 1287 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AC034111.1-201ENST00000562143 3770 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 MFSD8-217ENST00000641178 4374 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AL034417.4-202ENST00000642135 2236 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 SALL4P7-201ENST00000555779 3120 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 MRPS17P1-201ENST00000596009 3130 ntBASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HDDC3Q8N4P3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 MAPK10-379ENST00000642013 1385 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 STAG3L4-201ENST00000352103 530 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 RNA5SP435-201ENST00000364044 108 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AL391419.1-201ENST00000398901 1275 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CYCSP17-201ENST00000407870 315 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AC244452.1-201ENST00000413798 141 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 PAICSP2-201ENST00000429118 1150 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 OR13C1P-201ENST00000457612 963 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 RPS14P8-201ENST00000478778 369 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 RN7SL187P-201ENST00000495587 303 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AC090568.1-201ENST00000509499 856 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AC026774.2-201ENST00000513990 1098 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AC068726.1-201ENST00000610993 341 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 AL359742.1-201ENST00000622497 540 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CTAGE11P-201ENST00000451540 2353 ntBASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.84□□□□□ -1.31
HDDC3Q8N4P3 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HDDC3Q8N4P3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
HDDC3Q8N4P3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HDDC3Q8N4P3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HDDC3Q8N4P3 AC007938.1-201ENST00000562524 2902 ntBASIC6.83□□□□□ -1.32
HDDC3Q8N4P3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.83□□□□□ -1.32
HDDC3Q8N4P3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HDDC3Q8N4P3 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms