Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNA5SP280-201ENST00000411230 115 ntBASIC7.37□□□□□ -1.23
TPM4P67936 AC023141.1-201ENST00000419418 379 ntBASIC7.37□□□□□ -1.23
TPM4P67936 AC134879.1-201ENST00000426062 394 ntBASIC7.37□□□□□ -1.23
TPM4P67936 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM4P67936 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM4P67936 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 ST13P2-201ENST00000438916 1109 ntBASIC7.37□□□□□ -1.23
TPM4P67936 AC004692.1-201ENST00000455430 424 ntBASIC7.37□□□□□ -1.23
TPM4P67936 CCNJP2-201ENST00000457810 1163 ntBASIC7.37□□□□□ -1.23
TPM4P67936 NPM1P27-201ENST00000502784 830 ntBASIC7.37□□□□□ -1.23
TPM4P67936 RN7SKP11-201ENST00000517018 287 ntBASIC7.37□□□□□ -1.23
TPM4P67936 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM4P67936 NDUFA3P2-201ENST00000531434 232 ntBASIC7.37□□□□□ -1.23
TPM4P67936 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM4P67936 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM4P67936 BUB1P1-201ENST00000603541 607 ntBASIC7.37□□□□□ -1.23
TPM4P67936 AL356986.1-201ENST00000604085 341 ntBASIC7.37□□□□□ -1.23
TPM4P67936 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.37□□□□□ -1.23
TPM4P67936 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM4P67936 AL132640.3-201ENST00000630473 177 ntBASIC7.37□□□□□ -1.23
TPM4P67936 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM4P67936 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 AC105235.1-201ENST00000623208 1816 ntBASIC7.36□□□□□ -1.23
TPM4P67936 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 GOT2P1-201ENST00000440922 1309 ntBASIC7.36□□□□□ -1.23
TPM4P67936 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 AL731532.1-201ENST00000623972 4236 ntBASIC7.36□□□□□ -1.23
TPM4P67936 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TPM4P67936 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 RNU12-2P-201ENST00000364789 156 ntBASIC7.36□□□□□ -1.23
TPM4P67936 U3.14-201ENST00000365363 227 ntBASIC7.36□□□□□ -1.23
TPM4P67936 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 RNA5SP474-201ENST00000391234 90 ntBASIC7.36□□□□□ -1.23
TPM4P67936 RNA5SP177-201ENST00000410122 107 ntBASIC7.36□□□□□ -1.23
TPM4P67936 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 RPL34P27-201ENST00000428810 349 ntBASIC7.36□□□□□ -1.23
TPM4P67936 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.36□□□□□ -1.23
TPM4P67936 RPL29P7-201ENST00000440227 457 ntBASIC7.36□□□□□ -1.23
TPM4P67936 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM4P67936 RN7SL165P-201ENST00000477476 291 ntBASIC7.36□□□□□ -1.23
TPM4P67936 AC091965.3-201ENST00000506236 208 ntBASIC7.36□□□□□ -1.23
TPM4P67936 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.36□□□□□ -1.23
TPM4P67936 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.36□□□□□ -1.23
TPM4P67936 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.36□□□□□ -1.23
TPM4P67936 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TPM4P67936 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.36□□□□□ -1.23
TPM4P67936 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.36□□□□□ -1.23
TPM4P67936 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM4P67936 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM4P67936 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 AC011369.2-201ENST00000624423 1567 ntBASIC7.36□□□□□ -1.23
TPM4P67936 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM4P67936 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM4P67936 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM4P67936 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 AL360271.1-201ENST00000395679 510 ntBASIC7.35□□□□□ -1.23
TPM4P67936 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 ANXA2P2-201ENST00000435128 1020 ntBASIC7.35□□□□□ -1.23
TPM4P67936 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 MARK2P8-201ENST00000476069 952 ntBASIC7.35□□□□□ -1.23
TPM4P67936 AL928654.1-201ENST00000476081 354 ntBASIC7.35□□□□□ -1.23
TPM4P67936 RN7SL654P-201ENST00000479178 292 ntBASIC7.35□□□□□ -1.23
TPM4P67936 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.35□□□□□ -1.23
TPM4P67936 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.35□□□□□ -1.23
TPM4P67936 MIR3159-201ENST00000584572 74 ntBASIC7.35□□□□□ -1.23
TPM4P67936 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 AL157899.1-201ENST00000604110 936 ntBASIC7.35□□□□□ -1.23
TPM4P67936 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 pRNA.9-201ENST00000618609 89 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms