Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC073488.9-201ENST00000631601 754 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 AC111152.1-202ENST00000635848 339 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AL513548.1-201ENST00000562904 1724 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 AL034417.4-202ENST00000642135 2236 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 CASC19-205ENST00000641013 1411 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 Y_RNA.62-201ENST00000362840 99 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 CXADRP1-201ENST00000398098 1095 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 MIR1204-201ENST00000408388 67 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AC007383.1-201ENST00000445875 636 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 EEF1B2P3-201ENST00000447718 678 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AC104339.1-201ENST00000465478 348 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 KCTD9P6-201ENST00000522306 950 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.98□□□□□ -1.13
RHBDL3P58872 AC010547.7-201ENST00000570323 333 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 AL365223.1-201ENST00000574864 1297 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 CXADRP3-202ENST00000617265 1100 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 BX284613.1-201ENST00000452221 1641 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RHBDL3P58872 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.98□□□□□ -1.13
RHBDL3P58872 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
RHBDL3P58872 ZNF101P1-201ENST00000435701 1720 ntBASIC7.98□□□□□ -1.13
RHBDL3P58872 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RHBDL3P58872 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 COL6A4P1-202ENST00000487147 4317 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.97□□□□□ -1.13
RHBDL3P58872 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 MIR1275-201ENST00000408770 80 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 RN7SKP86-201ENST00000410454 332 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AC017078.1-201ENST00000416146 368 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AL663061.1-201ENST00000416625 580 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.97□□□□□ -1.13
RHBDL3P58872 CRYGGP-201ENST00000443337 145 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.97□□□□□ -1.13
RHBDL3P58872 MTCYBP14-201ENST00000457471 715 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 RARRES2P3-201ENST00000457739 473 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 RN7SL382P-201ENST00000482631 282 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 OR52A4P-203ENST00000498233 1014 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.97□□□□□ -1.13
RHBDL3P58872 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.97□□□□□ -1.13
RHBDL3P58872 BCAS2P1-201ENST00000528022 632 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AC124891.1-201ENST00000536322 519 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.97□□□□□ -1.13
RHBDL3P58872 AP003115.1-201ENST00000569849 463 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AP000919.1-201ENST00000582850 985 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.97□□□□□ -1.13
RHBDL3P58872 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 MIR6806-201ENST00000622141 64 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 AL683826.1-201ENST00000624104 627 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms