Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PTPN9P43378 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PTPN9P43378 RNA5SP442-201ENST00000365050 107 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AL136100.1-201ENST00000407696 330 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 RN7SKP188-201ENST00000410789 317 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 SETP22-201ENST00000412243 957 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 FABP5P1-201ENST00000423401 411 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 FABP5P2-201ENST00000439042 408 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.98□□□□□ -1.29
PTPN9P43378 RPS10P14-201ENST00000440748 502 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.98□□□□□ -1.29
PTPN9P43378 AL139156.3-201ENST00000454802 394 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AC007688.1-201ENST00000475592 759 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 RPL23AP68-201ENST00000480924 445 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC008868.1-201ENST00000509786 737 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AL390198.2-201ENST00000510553 222 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.98□□□□□ -1.29
PTPN9P43378 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.98□□□□□ -1.29
PTPN9P43378 PHBP2-201ENST00000532859 806 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC091133.5-201ENST00000603088 301 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 Z93930.3-201ENST00000607919 749 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AC004241.2-201ENST00000614562 444 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AC005393.1-201ENST00000617916 584 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 AC091059.2-201ENST00000623355 614 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.98□□□□□ -1.29
PTPN9P43378 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.98□□□□□ -1.29
PTPN9P43378 AC110597.1-201ENST00000562669 3176 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PTPN9P43378 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
PTPN9P43378 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PTPN9P43378 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
PTPN9P43378 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
PTPN9P43378 AC009120.2-204ENST00000621548 2032 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.98□□□□□ -1.29
PTPN9P43378 UGT2B27P-201ENST00000505092 1620 ntBASIC6.98□□□□□ -1.29
PTPN9P43378 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.97□□□□□ -1.29
PTPN9P43378 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PTPN9P43378 RNA5SP321-201ENST00000362722 111 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 RN7SKP257-201ENST00000364525 309 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AL359694.1-201ENST00000403247 604 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AL049697.3-201ENST00000406493 982 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.97□□□□□ -1.29
PTPN9P43378 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.97□□□□□ -1.29
PTPN9P43378 AL672212.1-201ENST00000422246 400 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 E2F6P1-201ENST00000428850 745 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.97□□□□□ -1.29
PTPN9P43378 UBE2V2P3-201ENST00000433562 437 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 E2F6P3-201ENST00000441743 743 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AL121578.2-201ENST00000448797 447 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC083906.1-201ENST00000509298 406 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.97□□□□□ -1.29
PTPN9P43378 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 IGHV3-57-201ENST00000520143 280 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.97□□□□□ -1.29
PTPN9P43378 AP002004.1-206ENST00000532441 876 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.97□□□□□ -1.29
PTPN9P43378 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.97□□□□□ -1.29
PTPN9P43378 AC244034.2-201ENST00000562504 509 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC010287.1-201ENST00000566916 357 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AP003115.1-201ENST00000569849 463 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 RN7SL32P-201ENST00000580514 281 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.97□□□□□ -1.29
PTPN9P43378 AC139493.1-201ENST00000604368 397 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC012653.2-201ENST00000621880 420 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AL035425.4-201ENST00000624509 1063 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.97□□□□□ -1.29
PTPN9P43378 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.97□□□□□ -1.29
PTPN9P43378 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.97□□□□□ -1.29
PTPN9P43378 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.97□□□□□ -1.29
PTPN9P43378 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.97□□□□□ -1.29
PTPN9P43378 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 Z93929.1-201ENST00000418200 1475 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.97□□□□□ -1.29
PTPN9P43378 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.97□□□□□ -1.29
PTPN9P43378 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PTPN9P43378 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.96□□□□□ -1.29
PTPN9P43378 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PTPN9P43378 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PTPN9P43378 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PTPN9P43378 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PTPN9P43378 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.96□□□□□ -1.29
PTPN9P43378 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PTPN9P43378 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PTPN9P43378 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms