Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF402P-201ENST00000404435 3100 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 DLEU2L-201ENST00000371086 3555 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL731556.1-201ENST00000394628 3711 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 RNA5SP65-201ENST00000363166 119 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 PDCL3P5-201ENST00000398028 722 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SKP268-201ENST00000411107 316 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC096537.2-201ENST00000413707 714 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 OSTCP2-201ENST00000437956 444 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC009518.3-201ENST00000438972 253 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 GOT2P2-201ENST00000450663 1251 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 OR7E7P-201ENST00000455678 1012 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC126615.1-201ENST00000470084 630 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SL382P-201ENST00000482631 282 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC074386.1-206ENST00000487102 761 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC122713.1-201ENST00000518368 1015 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 FAM30C-201ENST00000561158 410 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC006120.1-201ENST00000579375 546 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 CTSLP2-201ENST00000580501 394 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 MIR4428-201ENST00000584884 73 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL031429.2-201ENST00000602605 649 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC004908.1-201ENST00000606572 541 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL445647.2-201ENST00000615170 130 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 MIR665-201ENST00000635949 72 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AL512329.1-201ENST00000404600 1592 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 AC012078.1-201ENST00000405035 1646 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ICE2P1-201ENST00000512800 1849 ntBASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC009779.8-201ENST00000641684 4384 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 SNORA70.3-201ENST00000365075 132 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SKP188-201ENST00000410789 317 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 SETP22-201ENST00000412243 957 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AL353626.3-201ENST00000413399 657 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AL645936.2-201ENST00000430565 928 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AL354714.5-201ENST00000450131 590 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 MEF2AP1-201ENST00000454867 863 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 NMNAT1P3-201ENST00000457517 888 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 PPP1R2P6-201ENST00000478565 588 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC025271.1-201ENST00000485045 429 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AP001994.1-201ENST00000527539 826 ntBASIC5.87□□□□□ -1.47
RHBDD3Q9Y3P4 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms