Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 VEZF1P1-201ENST00000423931 1541 ntBASIC5.67□□□□□ -1.5
GPN1Q9HCN4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GPN1Q9HCN4 AC005261.6-201ENST00000623072 1387 ntBASIC5.67□□□□□ -1.5
GPN1Q9HCN4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC096992.2-201ENST00000609553 1684 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC020656.2-201ENST00000613291 5309 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 OR56A4-201ENST00000330728 1209 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 SNORA73B-201ENST00000363217 204 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RNU4-59P-201ENST00000364447 116 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RN7SKP161-201ENST00000411110 305 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RPS29P5-201ENST00000452777 171 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 TUBB4BP2-201ENST00000454125 798 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RPL10P6-201ENST00000457497 318 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RPS7P11-201ENST00000484240 586 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AP000926.3-201ENST00000497201 299 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC090058.1-201ENST00000498788 435 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 SCARNA6-201ENST00000515982 265 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 SNORD116-30-201ENST00000516468 85 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 PHBP2-201ENST00000532859 806 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC084033.1-201ENST00000550830 633 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC007255.2-201ENST00000604053 631 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 QTRT1P1-201ENST00000604344 1078 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AL109918.2-201ENST00000605188 279 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC024589.2-201ENST00000605642 1294 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC103974.2-201ENST00000611319 778 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC006335.3-201ENST00000613408 292 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 OR8G7P-201ENST00000616658 848 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AL109924.4-201ENST00000623089 670 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC106795.5-201ENST00000623288 454 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC068205.4-201ENST00000637880 804 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 SMG7-216ENST00000638826 219 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 CASC19-238ENST00000641523 1558 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC062022.1-201ENST00000451026 1684 ntBASIC5.66□□□□□ -1.5
GPN1Q9HCN4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GPN1Q9HCN4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
GPN1Q9HCN4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GPN1Q9HCN4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPN1Q9HCN4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms