Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 MIR3688-2-201ENST00000636963 87 ntBASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 MAN1A2P1-201ENST00000590286 1400 ntBASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 AL353625.1-201ENST00000569097 3131 ntBASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CNTNAP3Q9BZ76 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 RNU6-697P-201ENST00000363348 107 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 TRAV35-201ENST00000390462 330 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 RNA5SP256-201ENST00000390978 113 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AL356317.1-201ENST00000396110 1436 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LDHAP4-201ENST00000397561 998 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AL138807.1-201ENST00000400354 459 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 MTCYBP24-201ENST00000420387 1106 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 HSPD1P12-201ENST00000429127 1069 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC245517.2-201ENST00000442890 346 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 ST13P20-201ENST00000447996 1065 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC008280.2-201ENST00000455473 307 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 RN7SL89P-201ENST00000480252 283 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC084871.2-201ENST00000503355 464 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 RNU6-943P-201ENST00000516960 98 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 NDUFS5P6-201ENST00000529136 295 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 BTG1P1-201ENST00000540396 508 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC009063.1-201ENST00000563342 702 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC007346.1-201ENST00000569208 867 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 MIR4999-201ENST00000585029 91 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AL137190.1-201ENST00000603288 282 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AL161729.3-201ENST00000603533 673 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 BNIP3P11-201ENST00000603878 563 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 OR51C1P-201ENST00000608504 942 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC025594.3-201ENST00000613068 790 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AC092279.2-201ENST00000623742 2189 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 AL132655.3-201ENST00000603095 1619 ntTSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms