Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 RNU6-386P-201ENST00000362650 107 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 RNU6-1017P-201ENST00000363613 106 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 MIR7-1-201ENST00000384871 110 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC006511.2-201ENST00000388966 660 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 RNU6-1055P-201ENST00000391085 107 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC009303.1-201ENST00000426307 352 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 UBE2V1P6-201ENST00000430840 422 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 VDAC2P3-201ENST00000430995 828 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC239800.1-201ENST00000442049 719 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 GTF2F2P2-201ENST00000445825 721 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC018892.2-201ENST00000457656 693 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 TAAR3P-201ENST00000466706 1078 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 TAAR3P-202ENST00000481759 1025 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC008417.1-201ENST00000510014 565 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC021146.10-201ENST00000515628 706 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 OR4N3P-201ENST00000559395 818 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AP006587.6-201ENST00000582128 1091 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 NPM1P45-201ENST00000583151 559 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 MIR3159-201ENST00000584572 74 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC067852.5-201ENST00000589299 310 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 EXOSC3P2-201ENST00000594464 497 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 PRR13P5-201ENST00000596581 442 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL023806.2-201ENST00000603042 263 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC108451.2-201ENST00000603875 538 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC135068.4-201ENST00000622949 925 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC018659.2-201ENST00000624690 715 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 QRSL1P3-201ENST00000552666 1316 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL136520.1-201ENST00000600311 1322 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SNX18Q96RF0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX18Q96RF0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SNX18Q96RF0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 RNU1-38P-201ENST00000362817 144 ntBASIC6.4□□□□□ -1.38
SNX18Q96RF0 RN7SKP107-201ENST00000364157 290 ntBASIC6.4□□□□□ -1.38
SNX18Q96RF0 RNA5SP442-201ENST00000365050 107 ntBASIC6.4□□□□□ -1.38
SNX18Q96RF0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX18Q96RF0 AL139039.2-201ENST00000407436 479 ntBASIC6.4□□□□□ -1.38
SNX18Q96RF0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.4□□□□□ -1.38
SNX18Q96RF0 PPIAP30-201ENST00000415473 519 ntBASIC6.4□□□□□ -1.38
SNX18Q96RF0 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX18Q96RF0 AL357078.2-201ENST00000416486 427 ntBASIC6.4□□□□□ -1.38
SNX18Q96RF0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX18Q96RF0 RPSAP1-201ENST00000421328 880 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms