Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC106782.7-201ENST00000624024 418 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC009033.1-201ENST00000624279 431 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC133555.5-201ENST00000624430 418 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 AL079343.1-201ENST00000572358 1771 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 ZNF547-201ENST00000282282 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 BTBD16-201ENST00000260723 1849 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-CQ95604 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HLA-CQ95604 NPAP1P4-201ENST00000443325 3310 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 ANTXRLP1-201ENST00000604933 1829 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HLA-CQ95604 RNA5SP218-201ENST00000363188 109 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 Y_RNA.372-201ENST00000365599 102 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HLA-CQ95604 SNORD86-201ENST00000391196 86 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 RN7SKP225-201ENST00000410405 352 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC019050.1-201ENST00000418508 492 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 RPS26P13-201ENST00000419030 330 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC242426.1-201ENST00000435270 960 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 DPPA3P1-201ENST00000448050 469 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 RN7SL761P-201ENST00000463259 278 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 RN7SL653P-201ENST00000494134 293 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AC034207.1-201ENST00000506742 948 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 LINC01085-203ENST00000511195 326 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 RNU6-358P-201ENST00000516564 75 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.69□□□□□ -1.02
HLA-CQ95604 PTTG3P-201ENST00000521862 606 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC121758.1-202ENST00000556917 658 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 LSM3P5-201ENST00000566307 306 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC012065.3-201ENST00000602736 439 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 RN7SL82P-201ENST00000611435 237 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 RN7SL628P-201ENST00000619139 237 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 PART1_3.1-201ENST00000619680 131 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC019278.1-201ENST00000623516 479 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 AP000577.1-201ENST00000624366 878 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 HARS-208ENST00000504366 3494 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-CQ95604 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-CQ95604 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
HLA-CQ95604 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms