Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 AC006213.5-201ENST00000619673 288 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC012629.3-201ENST00000623397 328 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 AL358913.2-201ENST00000553881 1548 ntBASIC7.2□□□□□ -1.26
NEK3P51956 SSXP3-201ENST00000442971 1300 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.2□□□□□ -1.26
NEK3P51956 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.2□□□□□ -1.26
NEK3P51956 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.19□□□□□ -1.26
NEK3P51956 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 OR10AB1P-202ENST00000641219 1686 ntBASIC7.19□□□□□ -1.26
NEK3P51956 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
NEK3P51956 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NEK3P51956 RN7SKP55-201ENST00000364888 307 ntBASIC7.19□□□□□ -1.26
NEK3P51956 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 RNA5SP53-201ENST00000391299 120 ntBASIC7.19□□□□□ -1.26
NEK3P51956 GABARAPL3-201ENST00000412799 354 ntBASIC7.19□□□□□ -1.26
NEK3P51956 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 UQCRHP1-204ENST00000424609 274 ntBASIC7.19□□□□□ -1.26
NEK3P51956 MTATP6P11-201ENST00000428071 670 ntBASIC7.19□□□□□ -1.26
NEK3P51956 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 FTLP17-201ENST00000432567 525 ntBASIC7.19□□□□□ -1.26
NEK3P51956 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 BX323845.2-201ENST00000458382 234 ntBASIC7.19□□□□□ -1.26
NEK3P51956 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NEK3P51956 SEC11B-201ENST00000518383 499 ntBASIC7.19□□□□□ -1.26
NEK3P51956 AC026688.1-201ENST00000520639 1168 ntBASIC7.19□□□□□ -1.26
NEK3P51956 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.19□□□□□ -1.26
NEK3P51956 RBMS2P1-201ENST00000525031 1226 ntBASIC7.19□□□□□ -1.26
NEK3P51956 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.19□□□□□ -1.26
NEK3P51956 SIGLEC31P-201ENST00000594237 551 ntBASIC7.19□□□□□ -1.26
NEK3P51956 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 QTRT1P1-201ENST00000604344 1078 ntBASIC7.19□□□□□ -1.26
NEK3P51956 RAB28P4-201ENST00000622233 665 ntBASIC7.19□□□□□ -1.26
NEK3P51956 AC073592.7-201ENST00000623659 507 ntBASIC7.19□□□□□ -1.26
NEK3P51956 AC087894.3-201ENST00000623682 349 ntBASIC7.19□□□□□ -1.26
NEK3P51956 MIR665-201ENST00000635949 72 ntBASIC7.19□□□□□ -1.26
NEK3P51956 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.19□□□□□ -1.26
NEK3P51956 AC116158.1-201ENST00000560231 2129 ntBASIC7.19□□□□□ -1.26
NEK3P51956 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 AC012078.1-201ENST00000405035 1646 ntBASIC7.19□□□□□ -1.26
NEK3P51956 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.19□□□□□ -1.26
NEK3P51956 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.19□□□□□ -1.26
NEK3P51956 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEK3P51956 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.19□□□□□ -1.26
NEK3P51956 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NEK3P51956 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.18□□□□□ -1.26
NEK3P51956 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.18□□□□□ -1.26
NEK3P51956 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 AC104837.1-201ENST00000444644 1587 ntBASIC7.18□□□□□ -1.26
NEK3P51956 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NEK3P51956 MTHFD2P5-201ENST00000320415 844 ntBASIC7.18□□□□□ -1.26
NEK3P51956 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 RN7SKP62-201ENST00000384539 329 ntBASIC7.18□□□□□ -1.26
NEK3P51956 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms