Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RN7SKP238-201ENST00000516483 249 ntBASIC9.26□□□□□ -0.93
CPS1P31327 RNA5SP206-201ENST00000516703 121 ntBASIC9.26□□□□□ -0.93
CPS1P31327 AC004232.1-201ENST00000571388 208 ntBASIC9.26□□□□□ -0.93
CPS1P31327 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC9.26□□□□□ -0.93
CPS1P31327 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC9.26□□□□□ -0.93
CPS1P31327 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC9.26□□□□□ -0.93
CPS1P31327 5S_rRNA.28-201ENST00000638107 119 ntBASIC9.26□□□□□ -0.93
CPS1P31327 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.25□□□□□ -0.93
CPS1P31327 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
CPS1P31327 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 MTHFD2P5-201ENST00000320415 844 ntBASIC9.25□□□□□ -0.93
CPS1P31327 RNA5SP65-201ENST00000363166 119 ntBASIC9.25□□□□□ -0.93
CPS1P31327 RNA5SP514-201ENST00000363717 111 ntBASIC9.25□□□□□ -0.93
CPS1P31327 BPHL-201ENST00000380368 797 ntTSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 IGLV3-4-201ENST00000432300 244 ntBASIC9.25□□□□□ -0.93
CPS1P31327 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 MORF4L1P4-201ENST00000450245 976 ntBASIC9.25□□□□□ -0.93
CPS1P31327 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC9.25□□□□□ -0.93
CPS1P31327 AC092121.1-201ENST00000569452 202 ntBASIC9.25□□□□□ -0.93
CPS1P31327 AC068768.2-201ENST00000602352 343 ntBASIC9.25□□□□□ -0.93
CPS1P31327 AP000864.1-201ENST00000609424 650 ntBASIC9.25□□□□□ -0.93
CPS1P31327 MIR6748-201ENST00000610433 71 ntBASIC9.25□□□□□ -0.93
CPS1P31327 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
CPS1P31327 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CPS1P31327 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC9.25□□□□□ -0.93
CPS1P31327 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC9.24□□□□□ -0.93
CPS1P31327 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
CPS1P31327 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC9.24□□□□□ -0.93
CPS1P31327 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC9.24□□□□□ -0.93
CPS1P31327 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CPS1P31327 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 RNA5SP110-201ENST00000362638 115 ntBASIC9.24□□□□□ -0.93
CPS1P31327 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC9.24□□□□□ -0.93
CPS1P31327 CFL1P4-201ENST00000451536 498 ntBASIC9.24□□□□□ -0.93
CPS1P31327 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 RPL5P14-201ENST00000494197 878 ntBASIC9.24□□□□□ -0.93
CPS1P31327 RN7SL104P-201ENST00000498686 293 ntBASIC9.24□□□□□ -0.93
CPS1P31327 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC9.24□□□□□ -0.93
CPS1P31327 AC095052.1-201ENST00000509955 863 ntBASIC9.24□□□□□ -0.93
CPS1P31327 LECT2-203ENST00000512872 762 ntTSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 NATP-201ENST00000523491 878 ntBASIC9.24□□□□□ -0.93
CPS1P31327 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC9.24□□□□□ -0.93
CPS1P31327 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
CPS1P31327 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CPS1P31327 AC087392.3-202ENST00000358446 1754 ntBASIC9.24□□□□□ -0.93
CPS1P31327 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CPS1P31327 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
CPS1P31327 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC9.23□□□□□ -0.93
CPS1P31327 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC9.23□□□□□ -0.93
CPS1P31327 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 OR3A2-201ENST00000408891 1076 ntBASIC9.23□□□□□ -0.93
CPS1P31327 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC9.23□□□□□ -0.93
CPS1P31327 AL663061.1-201ENST00000416625 580 ntBASIC9.23□□□□□ -0.93
CPS1P31327 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 ACA64.1-201ENST00000459171 127 ntBASIC9.23□□□□□ -0.93
CPS1P31327 AC114781.3-201ENST00000512083 142 ntBASIC9.23□□□□□ -0.93
CPS1P31327 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC9.23□□□□□ -0.93
CPS1P31327 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC9.23□□□□□ -0.93
CPS1P31327 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC9.23□□□□□ -0.93
CPS1P31327 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC9.23□□□□□ -0.93
CPS1P31327 AC092944.2-201ENST00000605443 889 ntBASIC9.23□□□□□ -0.93
CPS1P31327 AC034229.6-201ENST00000623704 224 ntBASIC9.23□□□□□ -0.93
CPS1P31327 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC9.23□□□□□ -0.93
CPS1P31327 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC9.23□□□□□ -0.93
CPS1P31327 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 AC091544.5-201ENST00000620192 3815 ntBASIC9.23□□□□□ -0.93
CPS1P31327 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CPS1P31327 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms