Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.46□□□□□ -1.38
CD40P25942 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 AL132640.2-201ENST00000559968 1698 ntBASIC6.45□□□□□ -1.38
CD40P25942 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 AC007342.7-201ENST00000624610 2337 ntBASIC6.45□□□□□ -1.38
CD40P25942 MTCO1P28-201ENST00000574177 1528 ntBASIC6.45□□□□□ -1.38
CD40P25942 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 SAMMSON-203ENST00000641005 2168 ntBASIC6.45□□□□□ -1.38
CD40P25942 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.45□□□□□ -1.38
CD40P25942 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CD40P25942 RN7SKP36-201ENST00000363997 312 ntBASIC6.45□□□□□ -1.38
CD40P25942 SNORD46-201ENST00000364043 104 ntBASIC6.45□□□□□ -1.38
CD40P25942 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 U6.112-201ENST00000384129 70 ntBASIC6.45□□□□□ -1.38
CD40P25942 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 RN7SKP117-201ENST00000410175 264 ntBASIC6.45□□□□□ -1.38
CD40P25942 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 CBX1P3-201ENST00000413296 527 ntBASIC6.45□□□□□ -1.38
CD40P25942 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 RPS24P7-201ENST00000416921 246 ntBASIC6.45□□□□□ -1.38
CD40P25942 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 FDPSP6-201ENST00000425091 512 ntBASIC6.45□□□□□ -1.38
CD40P25942 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 RPS6P15-201ENST00000431996 751 ntBASIC6.45□□□□□ -1.38
CD40P25942 Z84478.1-201ENST00000438230 1219 ntBASIC6.45□□□□□ -1.38
CD40P25942 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 HMGB1P5-202ENST00000451497 985 ntBASIC6.45□□□□□ -1.38
CD40P25942 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 PTGES3P5-201ENST00000455109 434 ntBASIC6.45□□□□□ -1.38
CD40P25942 RPL7L1P3-201ENST00000455249 689 ntBASIC6.45□□□□□ -1.38
CD40P25942 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 RPL6P9-201ENST00000466502 859 ntBASIC6.45□□□□□ -1.38
CD40P25942 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 AC004263.1-201ENST00000479327 332 ntBASIC6.45□□□□□ -1.38
CD40P25942 PSMA2P2-201ENST00000504319 686 ntBASIC6.45□□□□□ -1.38
CD40P25942 RN7SKP141-201ENST00000516167 338 ntBASIC6.45□□□□□ -1.38
CD40P25942 RNU6-1028P-201ENST00000517164 93 ntBASIC6.45□□□□□ -1.38
CD40P25942 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 LRRC6P1-201ENST00000532188 885 ntBASIC6.45□□□□□ -1.38
CD40P25942 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.45□□□□□ -1.38
CD40P25942 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.45□□□□□ -1.38
CD40P25942 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.45□□□□□ -1.38
CD40P25942 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.45□□□□□ -1.38
CD40P25942 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 CCDC58P3-201ENST00000590792 430 ntBASIC6.45□□□□□ -1.38
CD40P25942 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.45□□□□□ -1.38
CD40P25942 AL139123.1-201ENST00000612008 430 ntBASIC6.45□□□□□ -1.38
CD40P25942 AC080112.3-201ENST00000612552 880 ntBASIC6.45□□□□□ -1.38
CD40P25942 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.45□□□□□ -1.38
CD40P25942 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CD40P25942 AC006141.1-201ENST00000581917 2170 ntBASIC6.45□□□□□ -1.38
CD40P25942 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC6.45□□□□□ -1.38
CD40P25942 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CD40P25942 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.45□□□□□ -1.38
CD40P25942 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
CD40P25942 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD40P25942 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 FADS2P1-201ENST00000611807 1446 ntBASIC6.44□□□□□ -1.38
CD40P25942 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms