Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCL1P22362 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCL1P22362 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.69□□□□□ -1.5
CCL1P22362 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCL1P22362 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCL1P22362 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCL1P22362 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.68□□□□□ -1.5
CCL1P22362 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.68□□□□□ -1.5
CCL1P22362 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 AC007998.4-201ENST00000612496 2533 ntBASIC5.68□□□□□ -1.5
CCL1P22362 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.68□□□□□ -1.5
CCL1P22362 RNA5SP152-201ENST00000365184 110 ntBASIC5.68□□□□□ -1.5
CCL1P22362 SNORA70H-201ENST00000383910 135 ntBASIC5.68□□□□□ -1.5
CCL1P22362 SNORA70J-201ENST00000384182 135 ntBASIC5.68□□□□□ -1.5
CCL1P22362 EEF1GP6-201ENST00000402309 905 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AL929472.1-201ENST00000417484 429 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.68□□□□□ -1.5
CCL1P22362 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.68□□□□□ -1.5
CCL1P22362 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.68□□□□□ -1.5
CCL1P22362 TVP23CP1-201ENST00000450317 639 ntBASIC5.68□□□□□ -1.5
CCL1P22362 NPM1P27-201ENST00000502784 830 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 SCARNA5-201ENST00000516201 276 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.68□□□□□ -1.5
CCL1P22362 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.68□□□□□ -1.5
CCL1P22362 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.68□□□□□ -1.5
CCL1P22362 MIR378C-201ENST00000578683 81 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC093635.1-201ENST00000609028 555 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC5.68□□□□□ -1.5
CCL1P22362 AP001264.1-201ENST00000620602 703 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC018558.4-201ENST00000622153 281 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCL1P22362 AC009779.8-201ENST00000641684 4384 ntBASIC5.68□□□□□ -1.5
CCL1P22362 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.68□□□□□ -1.5
CCL1P22362 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCL1P22362 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCL1P22362 AC006213.6-201ENST00000623722 4179 ntBASIC5.68□□□□□ -1.5
CCL1P22362 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.68□□□□□ -1.5
CCL1P22362 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCL1P22362 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.67□□□□□ -1.5
CCL1P22362 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 AC119674.1-213ENST00000641177 1386 ntBASIC5.67□□□□□ -1.5
CCL1P22362 AC092701.1-201ENST00000623627 1551 ntBASIC5.67□□□□□ -1.5
CCL1P22362 AC006511.3-201ENST00000624929 1783 ntBASIC5.67□□□□□ -1.5
CCL1P22362 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCL1P22362 AC105749.1-201ENST00000631338 2008 ntBASIC5.67□□□□□ -1.5
CCL1P22362 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.67□□□□□ -1.5
CCL1P22362 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCL1P22362 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.67□□□□□ -1.5
CCL1P22362 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCL1P22362 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCL1P22362 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCL1P22362 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 SNORD8-201ENST00000363915 110 ntBASIC5.67□□□□□ -1.5
CCL1P22362 RNA5SP302-201ENST00000364896 100 ntBASIC5.67□□□□□ -1.5
CCL1P22362 MIR187-201ENST00000385062 109 ntBASIC5.67□□□□□ -1.5
CCL1P22362 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.67□□□□□ -1.5
CCL1P22362 AL079341.1-201ENST00000404701 1207 ntBASIC5.67□□□□□ -1.5
CCL1P22362 AL590635.1-201ENST00000406314 586 ntBASIC5.67□□□□□ -1.5
CCL1P22362 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 AC091492.1-201ENST00000419844 272 ntBASIC5.67□□□□□ -1.5
CCL1P22362 PPIAP23-201ENST00000420099 497 ntBASIC5.67□□□□□ -1.5
CCL1P22362 RPL23AP85-201ENST00000421838 433 ntBASIC5.67□□□□□ -1.5
CCL1P22362 FDPSP6-201ENST00000425091 512 ntBASIC5.67□□□□□ -1.5
CCL1P22362 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCL1P22362 FECHP1-201ENST00000431896 1214 ntBASIC5.67□□□□□ -1.5
CCL1P22362 AC003989.1-201ENST00000434569 565 ntBASIC5.67□□□□□ -1.5
CCL1P22362 CHCHD4P5-201ENST00000436684 427 ntBASIC5.67□□□□□ -1.5
CCL1P22362 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.67□□□□□ -1.5
CCL1P22362 RPL6P24-201ENST00000445338 864 ntBASIC5.67□□□□□ -1.5
CCL1P22362 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.67□□□□□ -1.5
CCL1P22362 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCL1P22362 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.67□□□□□ -1.5
CCL1P22362 SCDP1-201ENST00000455244 1081 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms