Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 RPL17P17-201ENST00000419491 557 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL606495.1-201ENST00000422100 813 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL365338.1-201ENST00000422282 858 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC092648.1-201ENST00000425870 423 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 RPS26P4-201ENST00000431743 355 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 MTND2P5-201ENST00000432656 1006 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL035246.1-201ENST00000433554 1255 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 GAPDHP75-201ENST00000433910 943 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 RPL5P27-201ENST00000437011 881 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 MTND2P22-201ENST00000444325 1033 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 AL451063.1-201ENST00000450164 1133 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL034399.1-201ENST00000451535 380 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 RPL7P61-201ENST00000451721 751 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 PMS2P11-201ENST00000451831 574 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AP002345.1-201ENST00000456493 928 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 RPS18P13-201ENST00000461260 454 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 RN7SL160P-201ENST00000468558 284 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC026254.2-201ENST00000475295 371 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 RN7SL88P-201ENST00000480166 299 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC026826.1-201ENST00000493002 361 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 RPL5P11-201ENST00000498068 893 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 IGLV1-62-201ENST00000518003 441 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 UBTFL10-201ENST00000528532 562 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL6A2P12110 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 OR4N3P-201ENST00000559395 818 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 PRELID3BP3-201ENST00000584963 545 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC106052.1-201ENST00000608029 497 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL096803.3-201ENST00000609032 532 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC124016.2-201ENST00000610058 665 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC079395.3-201ENST00000615161 484 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 MIR1264-201ENST00000616374 69 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL355493.4-201ENST00000618530 292 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 AC135068.4-201ENST00000622949 925 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC090099.1-204ENST00000623626 849 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC093875.1-201ENST00000623688 504 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AP002967.1-201ENST00000624203 539 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AP003399.1-201ENST00000637534 361 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC119674.1-209ENST00000642031 997 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.15□□□□□ -1.27
COL6A2P12110 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.15□□□□□ -1.27
COL6A2P12110 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL6A2P12110 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL6A2P12110 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL6A2P12110 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL6A2P12110 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.15□□□□□ -1.27
COL6A2P12110 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL6A2P12110 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 RPL12P13-201ENST00000310055 497 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 RNU1-21P-201ENST00000363327 163 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL6A2P12110 PTMAP8-201ENST00000397729 342 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 AC107081.1-201ENST00000414975 361 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC231533.2-201ENST00000419045 978 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AL390840.1-201ENST00000420303 988 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 FABP5P1-201ENST00000423401 411 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 GAPDHP46-201ENST00000424043 994 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms