Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL157698.1-201ENST00000415190 1011 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 EIF4A1P13-201ENST00000415667 230 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL663061.1-201ENST00000416625 580 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 VDAC1P10-201ENST00000416715 891 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 RPL22P11-201ENST00000434894 385 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 RPL5P10-201ENST00000445207 894 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC103563.5-201ENST00000455643 364 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 NMNAT1P3-201ENST00000457517 888 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 SNX18P26-201ENST00000458433 740 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 RPL7P17-201ENST00000470927 724 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC079594.1-201ENST00000489757 331 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 RPL23AP80-201ENST00000495605 424 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC016559.1-201ENST00000511420 199 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC008429.4-201ENST00000521201 182 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL121579.2-201ENST00000555466 590 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC090651.1-201ENST00000567865 634 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC013489.3-201ENST00000623274 517 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 SNORA16A-202ENST00000628458 135 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 FGL2-202ENST00000637771 989 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL512329.1-201ENST00000404600 1592 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AC078880.4-201ENST00000617627 1749 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC074141.1-201ENST00000588129 2995 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC090114.1-201ENST00000393266 448 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 CYCSP17-201ENST00000407870 315 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 GAPDHP55-201ENST00000423136 803 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC018804.1-201ENST00000430381 618 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 SNRPCP3-201ENST00000474888 476 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 RPL7AP56-201ENST00000476420 791 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AL035690.1-201ENST00000490892 383 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 HNRNPA1P17-201ENST00000496620 924 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 PHBP2-201ENST00000532859 806 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 LYZ-202ENST00000548839 558 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC011921.2-201ENST00000589465 152 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB1P01920 AL109924.4-201ENST00000623089 670 ntBASIC5.69□□□□□ -1.5
HLA-DQB1P01920 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms