Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AL138479.1-201ENST00000426913 484 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 OR52S1P-201ENST00000427016 937 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 PARP4P1-201ENST00000435945 2337 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 H3F3BP1-201ENST00000440551 403 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 GOT2P2-201ENST00000450663 1251 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AL096803.1-201ENST00000456921 1021 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL492P-201ENST00000460700 295 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 CBX5P1-201ENST00000468470 561 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 RPS10P28-201ENST00000480396 498 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC134698.1-201ENST00000511619 643 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP67-201ENST00000515905 235 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 RNA5SP278-201ENST00000517055 102 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC021820.1-201ENST00000525564 808 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AP005139.1-201ENST00000580702 1647 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 WDR45BP1-201ENST00000583470 1029 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 MIR5682-201ENST00000584864 76 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC090241.1-201ENST00000587732 621 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AL353807.4-201ENST00000604995 257 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AL445647.2-201ENST00000615170 130 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC005753.1-201ENST00000623837 618 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC017037.4-201ENST00000624526 826 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 SAMMSON-210ENST00000641260 1308 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC005225.5-201ENST00000623547 2225 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 DLEU2L-201ENST00000371086 3555 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AL451064.2-201ENST00000623514 1654 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AC024937.2-201ENST00000411669 1242 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 RPS7P4-201ENST00000444127 582 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ST13P21-201ENST00000453250 1098 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 RPS16P9-201ENST00000477220 427 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL382P-201ENST00000482631 282 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 H3F3AP3-201ENST00000497682 407 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 RNA5SP318-201ENST00000516352 92 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AC122713.1-201ENST00000518368 1015 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms