Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RN7SKP254-201ENST00000410685 310 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 OR13D3P-201ENST00000412501 937 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL663061.1-201ENST00000416625 580 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SETP10-201ENST00000424368 814 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 GAPDHP57-201ENST00000424400 585 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC114402.1-201ENST00000427282 328 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL604028.2-201ENST00000437848 788 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 ASS1P4-201ENST00000439462 1234 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 RPL29P7-201ENST00000440227 457 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL589765.3-201ENST00000446084 462 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC007690.1-201ENST00000451924 468 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 RPS27AP3-201ENST00000453803 454 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 PGGT1BP1-201ENST00000455321 1023 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC013429.1-201ENST00000456604 422 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SNORA81.1-201ENST00000458922 177 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 APOA2-203ENST00000463812 401 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL515P-201ENST00000463999 297 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 RPL34P34-201ENST00000465389 354 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC008638.2-201ENST00000503840 715 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC083906.3-201ENST00000509201 466 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AP000859.1-201ENST00000525536 307 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 FGF12-AS1-202ENST00000530635 555 ntTSL 4 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL162632.2-201ENST00000553933 399 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL121579.2-201ENST00000555466 590 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 BCAP31P2-201ENST00000563143 399 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL246P-201ENST00000584467 296 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 MIR132-201ENST00000591554 101 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AF146191.1-201ENST00000604941 889 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL022238.3-201ENST00000609279 443 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 YARS-210ENST00000616261 1167 ntTSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 GZMB-209ENST00000616551 559 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 MIR8078-201ENST00000619811 84 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SNORA50B-202ENST00000630737 137 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 OR52I2-202ENST00000641486 1115 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 AC093225.1-201ENST00000506867 1408 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 HSPA8P18-201ENST00000439846 1928 ntBASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.25□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC027313.1-201ENST00000509159 1666 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms