Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AL390198.2-201ENST00000510553 222 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC138517.1-201ENST00000515724 568 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 BTG1P1-201ENST00000540396 508 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 ANP32BP1-202ENST00000568553 737 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 RN7SL199P-201ENST00000578752 281 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 RN7SL656P-201ENST00000579044 281 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 RN7SL404P-201ENST00000582421 281 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC253576.2-201ENST00000618815 580 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 RAB28P4-201ENST00000622233 665 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AC010132.4-201ENST00000569883 1368 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AF131215.2-201ENST00000531549 1710 ntBASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
SYNPO2Q9UMS6 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 RNA5SP308-201ENST00000362532 115 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 UBTFL2-201ENST00000411859 1191 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 GAPDHP37-201ENST00000442317 968 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC099670.1-201ENST00000455141 783 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 YRDCP3-201ENST00000456507 480 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 RN7SL37P-201ENST00000490461 307 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC091849.1-201ENST00000509920 121 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 RPL29P33-201ENST00000587474 316 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC245128.3-201ENST00000594721 748 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC012175.1-201ENST00000603755 531 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC091768.1-201ENST00000609258 930 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 AC068213.1-201ENST00000625124 226 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
SYNPO2Q9UMS6 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNPO2Q9UMS6 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNPO2Q9UMS6 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNPO2Q9UMS6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNPO2Q9UMS6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms