Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 OR2AH1P-202ENST00000641232 2744 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 RNA5SP442-201ENST00000365050 107 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 RNU1-55P-201ENST00000365510 158 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AL353626.3-201ENST00000413399 657 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 MEAF6P1-201ENST00000416092 327 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 TREML3P-201ENST00000457327 501 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC096661.1-201ENST00000515870 822 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC130366.1-201ENST00000526505 1192 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 DPPA3P2-201ENST00000553589 478 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC106785.4-201ENST00000569492 412 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC079791.1-201ENST00000605356 973 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC005355.2-201ENST00000625064 484 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 AC087392.3-202ENST00000358446 1754 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RNA5SP355-201ENST00000365317 135 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ZNF37CP-201ENST00000406795 241 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RPS10P14-201ENST00000440748 502 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 SLAMF6P1-201ENST00000451067 602 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AL354872.1-201ENST00000456361 967 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RN7SL390P-201ENST00000470634 284 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 FTH1P8-201ENST00000498161 514 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC083906.1-201ENST00000509298 406 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC253576.1-201ENST00000511645 1156 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC017007.1-201ENST00000511960 415 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 KCTD9P4-201ENST00000526766 1166 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RN7SL270P-201ENST00000579643 281 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 MRPL57P3-201ENST00000619218 176 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 KYNUP2-201ENST00000582280 1329 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AL139384.2-201ENST00000613809 3590 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 AC022507.1-201ENST00000548349 1505 ntBASIC6.91□□□□□ -1.3
PCDH9Q9HC56 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PCDH9Q9HC56 HSPD1P1-201ENST00000503199 1726 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC126474.2-201ENST00000623268 1750 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms