Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SNRPCP6-201ENST00000528310 210 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 SETP17-201ENST00000534163 817 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 MIR378C-201ENST00000578683 81 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC117503.3-201ENST00000623811 601 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 SNX18P10-201ENST00000625014 519 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC095038.1-201ENST00000429248 1591 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RNA5SP512-201ENST00000364550 120 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AL590635.1-201ENST00000406314 586 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RN7SKP91-201ENST00000410852 288 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 CHCHD4P5-201ENST00000436684 427 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RPS7P4-201ENST00000444127 582 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RBMY2EP-202ENST00000456360 940 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC007068.2-201ENST00000543168 395 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC027667.1-201ENST00000545814 304 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AL391001.1-201ENST00000602747 715 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC005014.3-201ENST00000605985 190 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AL596275.2-208ENST00000641192 594 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 AC241584.2-201ENST00000637142 2090 ntBASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ZNF549Q6P9A3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC008957.3-201ENST00000624112 2242 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 MKI67P1-201ENST00000604297 1460 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL591848.4-201ENST00000567832 3472 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL359694.1-201ENST00000403247 604 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 RPS7P12-201ENST00000422385 582 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 RPL26P30-201ENST00000453533 435 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 RPL7AP23-201ENST00000482625 776 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 SNORA58-201ENST00000505219 137 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC091849.1-201ENST00000509920 121 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms