Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 LCOR-201ENST00000286067 4542 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ZNF658B-201ENST00000602828 3408 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AL359195.2-201ENST00000623657 4412 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AL133260.1-201ENST00000405720 405 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 MTND6P1-201ENST00000417434 424 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC128677.1-201ENST00000436016 442 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AP006587.5-201ENST00000532033 739 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC140063.1-201ENST00000541343 259 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 MIR6889-201ENST00000613185 59 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC007603.3-201ENST00000636915 979 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 CUBNP3-201ENST00000457461 1784 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 AL669831.5-218ENST00000591702 1873 ntBASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.28□□□□□ -1.4
H3F3CQ6NXT2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 SNORA70.3-201ENST00000365075 132 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 MIR199B-201ENST00000384849 110 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 RPL9P21-201ENST00000392269 505 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 VN1R53P-201ENST00000429536 957 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 SUMO2P8-201ENST00000434672 286 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 SNRPBP1-201ENST00000443634 282 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 RN7SL187P-201ENST00000495587 303 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC021220.1-201ENST00000507445 630 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC138517.1-201ENST00000515724 568 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 SNRPCP6-201ENST00000528310 210 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 FXNP1-201ENST00000555153 337 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AL365223.1-201ENST00000574864 1297 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms