Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL604028.2-201ENST00000437848 788 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 RNF2P1-201ENST00000442955 1010 ntBASIC6.05□□□□□ -1.44
SOX2P48431 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 PABPC1P10-201ENST00000464731 381 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 TRBV8-1-201ENST00000481590 279 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 AC011352.2-201ENST00000514574 1016 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 MTND5P21-201ENST00000531961 522 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX2P48431 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX2P48431 SETP3-201ENST00000581726 813 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC067852.5-201ENST00000589299 310 ntBASIC6.05□□□□□ -1.44
SOX2P48431 BNIP3P40-201ENST00000596017 556 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 AC034229.4-201ENST00000607861 441 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC027271.1-201ENST00000610270 610 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC016957.2-201ENST00000616998 848 ntBASIC6.05□□□□□ -1.44
SOX2P48431 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 AC087269.2-201ENST00000641764 975 ntBASIC6.05□□□□□ -1.44
SOX2P48431 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 AP002800.1-201ENST00000624982 2225 ntBASIC6.05□□□□□ -1.44
SOX2P48431 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 RN7SKP47-201ENST00000365347 328 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX2P48431 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 RNU6-152P-201ENST00000384037 107 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 RPSAP60-201ENST00000415403 880 ntBASIC6.04□□□□□ -1.44
SOX2P48431 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 AC023141.6-201ENST00000429418 337 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.04□□□□□ -1.44
SOX2P48431 RPL34P34-201ENST00000465389 354 ntBASIC6.04□□□□□ -1.44
SOX2P48431 RPS2P25-201ENST00000467247 580 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AP000805.1-201ENST00000471604 784 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC068522.1-201ENST00000482895 345 ntBASIC6.04□□□□□ -1.44
SOX2P48431 RN7SL306P-201ENST00000492941 296 ntBASIC6.04□□□□□ -1.44
SOX2P48431 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX2P48431 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 RN7SKP5-201ENST00000517045 272 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AP000662.1-201ENST00000530952 487 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX2P48431 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 AC084033.2-201ENST00000551532 967 ntBASIC6.04□□□□□ -1.44
SOX2P48431 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX2P48431 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX2P48431 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX2P48431 BNIP3P31-201ENST00000604515 566 ntBASIC6.04□□□□□ -1.44
SOX2P48431 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SOX2P48431 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms