Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZIC3O60481 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZIC3O60481 RNU1-5P-201ENST00000362684 144 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 RNU4-23P-201ENST00000362839 140 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 RNU1-55P-201ENST00000365510 158 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 USP9YP19-201ENST00000412165 485 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.1□□□□□ -1.43
ZIC3O60481 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC234771.4-201ENST00000441416 730 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 CRYGGP-201ENST00000443337 145 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 NPM1P9-201ENST00000453156 844 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 AP003385.3-201ENST00000472498 287 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 RPS7P11-201ENST00000484240 586 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC074386.1-206ENST00000487102 761 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 RN7SL37P-201ENST00000490461 307 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC091849.1-201ENST00000509920 121 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC084851.2-201ENST00000530377 364 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.1□□□□□ -1.43
ZIC3O60481 AL445383.1-201ENST00000554689 874 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.1□□□□□ -1.43
ZIC3O60481 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 ANP32BP1-202ENST00000568553 737 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.1□□□□□ -1.43
ZIC3O60481 RPL7AP69-201ENST00000595306 806 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.1□□□□□ -1.43
ZIC3O60481 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AL023583.1-201ENST00000607518 1143 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AC120057.5-201ENST00000623840 154 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC104820.1-201ENST00000624183 307 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 AC099654.15-201ENST00000639802 509 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZIC3O60481 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZIC3O60481 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 ASNSP6-201ENST00000592770 1618 ntBASIC6.1□□□□□ -1.43
ZIC3O60481 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.1□□□□□ -1.43
ZIC3O60481 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
ZIC3O60481 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZIC3O60481 AC067942.1-201ENST00000488045 1493 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 MKI67P1-201ENST00000604297 1460 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 FANCD2P2-201ENST00000437591 1400 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
ZIC3O60481 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 AC022417.1-201ENST00000624768 1303 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 RPL24P4-201ENST00000326586 421 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms