Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SSX4O60224 RNU12-2P-201ENST00000364789 156 ntBASIC6.21□□□□□ -1.42
SSX4O60224 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 AC009413.1-201ENST00000414823 399 ntBASIC6.21□□□□□ -1.42
SSX4O60224 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.21□□□□□ -1.42
SSX4O60224 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 UBE2V2P3-201ENST00000433562 437 ntBASIC6.21□□□□□ -1.42
SSX4O60224 UBE2V2P1-201ENST00000434717 398 ntBASIC6.21□□□□□ -1.42
SSX4O60224 H3F3BP1-201ENST00000440551 403 ntBASIC6.21□□□□□ -1.42
SSX4O60224 AC079781.1-201ENST00000441505 394 ntBASIC6.21□□□□□ -1.42
SSX4O60224 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 FUNDC2P2-202ENST00000443452 493 ntBASIC6.21□□□□□ -1.42
SSX4O60224 SS18L2P1-201ENST00000445923 213 ntBASIC6.21□□□□□ -1.42
SSX4O60224 AC005517.1-201ENST00000452091 489 ntBASIC6.21□□□□□ -1.42
SSX4O60224 AC073476.1-201ENST00000452854 407 ntBASIC6.21□□□□□ -1.42
SSX4O60224 RPSAP24-201ENST00000461543 873 ntBASIC6.21□□□□□ -1.42
SSX4O60224 RN7SL267P-201ENST00000485107 261 ntBASIC6.21□□□□□ -1.42
SSX4O60224 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 RPL23AP80-201ENST00000495605 424 ntBASIC6.21□□□□□ -1.42
SSX4O60224 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX4O60224 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 AC078909.2-201ENST00000620584 398 ntBASIC6.21□□□□□ -1.42
SSX4O60224 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 AP003400.2-201ENST00000624036 666 ntBASIC6.21□□□□□ -1.42
SSX4O60224 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 MFSD8-256ENST00000641949 1640 ntBASIC6.21□□□□□ -1.42
SSX4O60224 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSX4O60224 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 IMMTP1-201ENST00000435590 2219 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AP004289.1-201ENST00000436307 2205 ntBASIC6.2□□□□□ -1.42
SSX4O60224 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
SSX4O60224 RN7SKP184-201ENST00000362348 333 ntBASIC6.2□□□□□ -1.42
SSX4O60224 TRAV35-201ENST00000390462 330 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AL590762.1-201ENST00000391782 432 ntBASIC6.2□□□□□ -1.42
SSX4O60224 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 SNORA3.1-201ENST00000408166 111 ntBASIC6.2□□□□□ -1.42
SSX4O60224 EIF4A1P13-201ENST00000415667 230 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.2□□□□□ -1.42
SSX4O60224 GEMIN2P2-201ENST00000418195 715 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AL593856.1-201ENST00000419949 805 ntBASIC6.2□□□□□ -1.42
SSX4O60224 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 MYO5BP3-201ENST00000431872 1279 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX4O60224 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX4O60224 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 AC084878.1-201ENST00000480555 648 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 SCARNA18.2-201ENST00000516882 84 ntBASIC6.2□□□□□ -1.42
SSX4O60224 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 AP003084.1-201ENST00000524828 742 ntBASIC6.2□□□□□ -1.42
SSX4O60224 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX4O60224 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX4O60224 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX4O60224 AC089984.3-201ENST00000552838 363 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms