Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL512430.2-201ENST00000406786 339 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RNU6-920P-201ENST00000410926 92 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC008173.1-201ENST00000418901 264 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 Z99127.2-201ENST00000441426 334 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 MRPL35P2-201ENST00000448009 511 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 TPT1P7-201ENST00000458300 517 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AP000852.1-201ENST00000472460 573 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL563P-201ENST00000481233 298 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 GSTO3P-201ENST00000504733 718 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RNU6-875P-201ENST00000516488 106 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 PSAT1P1-201ENST00000518968 1106 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC073913.2-201ENST00000541512 145 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL121839.1-201ENST00000556233 1185 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL162730.1-201ENST00000605734 292 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC068205.4-201ENST00000637880 804 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 OR7A2P-202ENST00000641312 1219 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC090220.1-201ENST00000593078 1699 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ELF2P3-201ENST00000445099 1506 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC010533.1-201ENST00000624875 2105 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL513523.1-201ENST00000417868 1309 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 SNORD116.1-201ENST00000365628 92 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 RNU1-8P-201ENST00000384328 165 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 Y_RNA.535-201ENST00000384612 99 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC019178.1-201ENST00000392337 440 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 FTH1P10-201ENST00000401830 930 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MIR1184-2-201ENST00000408263 99 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MIR1277-201ENST00000408536 78 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MIR1184-1-201ENST00000408606 99 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MIR1184-3-201ENST00000408676 99 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 SNORA73.3-201ENST00000410213 189 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 RANP4-201ENST00000413361 655 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL445183.3-201ENST00000414168 502 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 OR10U1P-201ENST00000414690 905 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 UBTFL3-201ENST00000418934 1024 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC023128.2-201ENST00000420880 1223 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL139158.1-201ENST00000424719 340 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 RPL3P8-201ENST00000432928 1191 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 CFL1P8-201ENST00000436148 475 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MTND5P14-201ENST00000441481 1267 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL035417.1-201ENST00000442754 214 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 OR2AI1P-201ENST00000448534 932 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC233982.1-201ENST00000451247 436 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms