Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC062022.1-201ENST00000451026 1684 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC010624.4-201ENST00000597606 1351 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AL353626.3-201ENST00000413399 657 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC009237.1-201ENST00000442127 744 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 RN7SL216P-201ENST00000471607 298 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AF305872.1-201ENST00000485217 471 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 RPL21P42-201ENST00000488408 464 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 SNRPCP6-201ENST00000528310 210 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC026458.1-201ENST00000564330 438 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AP003115.1-201ENST00000569849 463 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 MRPS21P9-201ENST00000571150 257 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC097467.4-201ENST00000605504 141 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC005277.2-201ENST00000617898 390 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC103564.3-201ENST00000621194 220 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC012254.5-201ENST00000623573 478 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC114546.4-201ENST00000624413 369 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 MIR665-201ENST00000635949 72 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AL596275.2-208ENST00000641192 594 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC073342.2-201ENST00000595842 1800 ntBASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO3Q9BXY4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC022507.1-201ENST00000548349 1505 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 RNA5SP333-201ENST00000363466 118 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 RNA5SP334-201ENST00000364825 118 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 YWHAZP5-201ENST00000419975 730 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 MTND1P10-201ENST00000426108 832 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 RPL7AP23-201ENST00000482625 776 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC074386.1-206ENST00000487102 761 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC091849.1-201ENST00000509920 121 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 IGLV3-6-201ENST00000523937 250 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC021820.1-201ENST00000525564 808 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 RPS27AP19-201ENST00000597285 458 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC011497.2-201ENST00000600255 639 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms