Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AP001804.1-201ENST00000526868 919 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR52K3P-201ENST00000531655 943 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC020914.7-201ENST00000594477 545 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC125494.2-201ENST00000602431 657 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC122710.3-201ENST00000606566 541 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AP000577.1-201ENST00000624366 878 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR5G5P-204ENST00000627642 621 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR5M2P-202ENST00000641241 4242 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AL355377.1-201ENST00000621125 1653 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC005332.9-201ENST00000620266 2921 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AP000432.2-201ENST00000624164 2048 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AP002512.4-202ENST00000641599 4530 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SKP55-201ENST00000364888 307 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AL050335.1-201ENST00000396909 869 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC083806.1-201ENST00000468934 316 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC079594.1-201ENST00000489757 331 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 RNA5SP518-201ENST00000515957 119 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AP003041.2-201ENST00000525666 1180 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC025252.2-201ENST00000537470 502 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC090115.2-201ENST00000548060 883 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 OR4F28P-201ENST00000559128 938 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 OR4F8P-201ENST00000589943 937 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 AL137246.2-201ENST00000613439 662 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 FAM74A6-203ENST00000615956 481 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SL126P-201ENST00000616400 299 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 PWRN1-212ENST00000569908 1435 ntBASIC5.57□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 AC068769.1-201ENST00000474767 2426 ntBASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 AL662795.2-201ENST00000624252 3706 ntBASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 NPM1P14-201ENST00000343743 866 ntBASIC5.56□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SKP186-201ENST00000365371 303 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms