Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 AL807761.1-201ENST00000417622 171 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.94□□□□□ -1.3
BRCA2P51587 AC022404.1-201ENST00000555320 273 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 AC091078.2-201ENST00000557145 559 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 AC087575.1-201ENST00000585087 229 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.94□□□□□ -1.3
BRCA2P51587 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC6.94□□□□□ -1.3
BRCA2P51587 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6.93□□□□□ -1.3
BRCA2P51587 DCAF4L1-201ENST00000333141 4772 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BRCA2P51587 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.93□□□□□ -1.3
BRCA2P51587 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.93□□□□□ -1.3
BRCA2P51587 CNOT7P2-201ENST00000441051 832 ntBASIC6.93□□□□□ -1.3
BRCA2P51587 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.93□□□□□ -1.3
BRCA2P51587 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 AL357562.1-201ENST00000624911 609 ntBASIC6.93□□□□□ -1.3
BRCA2P51587 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.93□□□□□ -1.3
BRCA2P51587 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.93□□□□□ -1.3
BRCA2P51587 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.93□□□□□ -1.3
BRCA2P51587 AC092111.1-201ENST00000618256 3358 ntBASIC6.93□□□□□ -1.3
BRCA2P51587 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BRCA2P51587 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
BRCA2P51587 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
BRCA2P51587 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
BRCA2P51587 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 RNA5SP183-201ENST00000362452 119 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 SRSF1P1-201ENST00000424058 520 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 RPS26P41-201ENST00000450370 284 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 AL645937.3-201ENST00000453647 936 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 AC024558.1-201ENST00000505008 528 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 RNU1-134P-201ENST00000362935 165 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
BRCA2P51587 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 AC016144.1-201ENST00000548175 1087 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.92□□□□□ -1.3
BRCA2P51587 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.92□□□□□ -1.3
BRCA2P51587 AC007204.2-201ENST00000615022 616 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 CUBNP3-201ENST00000457461 1784 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 GABARAPL3-201ENST00000412799 354 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 RN7SL714P-201ENST00000487050 298 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 RN7SL346P-201ENST00000491561 294 ntBASIC6.92□□□□□ -1.3
BRCA2P51587 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.92□□□□□ -1.3
BRCA2P51587 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.92□□□□□ -1.3
BRCA2P51587 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
BRCA2P51587 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BRCA2P51587 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms