Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.38□□□□□ -1.07
LIG1P18858 AC044860.3-201ENST00000559957 368 ntBASIC8.38□□□□□ -1.07
LIG1P18858 DNM1P31-201ENST00000564149 696 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.38□□□□□ -1.07
LIG1P18858 MIR4685-201ENST00000578185 69 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 AC010463.3-201ENST00000594077 500 ntBASIC8.38□□□□□ -1.07
LIG1P18858 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.38□□□□□ -1.07
LIG1P18858 AC008536.1-201ENST00000602872 669 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AL109936.2-201ENST00000605350 650 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AL365400.2-201ENST00000605604 902 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 AC009090.3-201ENST00000616553 565 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AL121985.2-201ENST00000621192 555 ntBASIC8.38□□□□□ -1.07
LIG1P18858 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
LIG1P18858 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LIG1P18858 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 WNK1-220ENST00000574564 1401 ntBASIC8.37□□□□□ -1.07
LIG1P18858 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
LIG1P18858 AC015871.3-201ENST00000618835 2261 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AP000641.1-201ENST00000531988 1639 ntBASIC8.37□□□□□ -1.07
LIG1P18858 MAPK10-383ENST00000642032 3390 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AC087045.3-201ENST00000623046 2468 ntBASIC8.37□□□□□ -1.07
LIG1P18858 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 AC107977.1-201ENST00000355745 939 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AL592310.1-201ENST00000414330 671 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AC009237.9-201ENST00000414800 347 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.37□□□□□ -1.07
LIG1P18858 VN1R21P-201ENST00000426703 765 ntBASIC8.37□□□□□ -1.07
LIG1P18858 MTND2P5-201ENST00000432656 1006 ntBASIC8.37□□□□□ -1.07
LIG1P18858 MTCO3P5-201ENST00000433620 714 ntBASIC8.37□□□□□ -1.07
LIG1P18858 ATP5LP4-201ENST00000434169 307 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AL606490.8-201ENST00000441624 319 ntBASIC8.37□□□□□ -1.07
LIG1P18858 OR6K5P-201ENST00000447050 945 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AL390728.3-201ENST00000452704 270 ntBASIC8.37□□□□□ -1.07
LIG1P18858 RPL31P53-201ENST00000457065 348 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AC115223.1-201ENST00000466377 870 ntBASIC8.37□□□□□ -1.07
LIG1P18858 RN7SL233P-201ENST00000469988 277 ntBASIC8.37□□□□□ -1.07
LIG1P18858 NDUFA5P9-201ENST00000472609 340 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.37□□□□□ -1.07
LIG1P18858 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC8.37□□□□□ -1.07
LIG1P18858 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC8.37□□□□□ -1.07
LIG1P18858 AC146944.3-201ENST00000509969 371 ntBASIC8.37□□□□□ -1.07
LIG1P18858 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 OR4A1P-201ENST00000532342 920 ntBASIC8.37□□□□□ -1.07
LIG1P18858 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 OSBPL9P5-201ENST00000542581 171 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.37□□□□□ -1.07
LIG1P18858 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.37□□□□□ -1.07
LIG1P18858 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.37□□□□□ -1.07
LIG1P18858 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.37□□□□□ -1.07
LIG1P18858 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.37□□□□□ -1.07
LIG1P18858 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.37□□□□□ -1.07
LIG1P18858 PRR13P3-201ENST00000603578 376 ntBASIC8.37□□□□□ -1.07
LIG1P18858 AC080112.3-201ENST00000612552 880 ntBASIC8.37□□□□□ -1.07
LIG1P18858 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 AL445528.2-201ENST00000620582 470 ntBASIC8.37□□□□□ -1.07
LIG1P18858 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
LIG1P18858 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.37□□□□□ -1.07
LIG1P18858 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
LIG1P18858 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LIG1P18858 AC007938.1-201ENST00000562524 2902 ntBASIC8.36□□□□□ -1.07
LIG1P18858 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 AC092821.3-202ENST00000641304 2767 ntBASIC8.36□□□□□ -1.07
LIG1P18858 PSMC1P4-201ENST00000515236 1327 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC018717.1-201ENST00000457712 1505 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.36□□□□□ -1.07
LIG1P18858 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
LIG1P18858 SNORA27.3-201ENST00000364937 134 ntBASIC8.36□□□□□ -1.07
LIG1P18858 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 MIR1231-201ENST00000408101 92 ntBASIC8.36□□□□□ -1.07
LIG1P18858 SNORA2C-201ENST00000408564 137 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC8.36□□□□□ -1.07
LIG1P18858 PPIL1P1-201ENST00000423936 499 ntBASIC8.36□□□□□ -1.07
LIG1P18858 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.36□□□□□ -1.07
LIG1P18858 RBMY3AP-201ENST00000449381 1145 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms