Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC027801.3-201ENST00000515049 698 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC021269.1-201ENST00000526860 705 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 MT1CP-201ENST00000567054 174 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AC005828.7-201ENST00000607331 556 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AP003789.1-201ENST00000617737 605 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 AL390882.1-201ENST00000618821 594 ntBASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CCDC187A0A096LP49 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CCDC187A0A096LP49 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 VN1R66P-201ENST00000412929 916 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 HSFY1P1-201ENST00000423928 1178 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 ANKRD54P1-201ENST00000433115 471 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 EEF1B2P3-201ENST00000447718 678 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 MTCYBP14-201ENST00000457471 715 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AP000805.1-201ENST00000471604 784 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 RN7SL654P-201ENST00000479178 292 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 RN7SL88P-201ENST00000480166 299 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 RPL12P7-201ENST00000493832 494 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 RN7SL569P-201ENST00000494652 288 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 RN7SKP196-201ENST00000516267 345 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC007537.1-201ENST00000539347 327 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC090888.3-201ENST00000558917 509 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC004232.2-201ENST00000574245 821 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC144521.1-201ENST00000607148 956 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AP005212.3-201ENST00000619964 528 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AL591926.1-201ENST00000620542 217 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 MIR6806-201ENST00000622141 64 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC005514.1-201ENST00000623521 208 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AC027559.1-201ENST00000636288 271 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 RNF19BPY-201ENST00000458209 1550 ntBASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms