Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
RIF1Q5UIP0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 RBMY2KP-201ENST00000418221 992 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 RPS10P20-201ENST00000494130 463 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 IGLV2-28-201ENST00000520681 304 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 MIR3691-201ENST00000578066 90 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AL137246.2-201ENST00000613439 662 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 FAM27E2-201ENST00000619668 403 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AC117409.1-201ENST00000470499 1310 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 VDAC1P2-201ENST00000423609 850 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 VDAC1P6-201ENST00000430062 855 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 Y_RNA.667-201ENST00000516212 107 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AC087360.1-201ENST00000518788 616 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 MIR6820-201ENST00000611508 62 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 AL731566.2-201ENST00000618971 317 ntBASIC6.52□□□□□ -1.37
RIF1Q5UIP0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC6.52□□□□□ -1.37
RIF1Q5UIP0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC091685.2-201ENST00000454924 864 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC093270.2-201ENST00000486157 792 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC114781.3-201ENST00000512083 142 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC011352.2-201ENST00000514574 1016 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AP003396.4-201ENST00000527574 265 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC012557.1-201ENST00000607115 611 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 RNA5SP346-201ENST00000363541 121 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC026254.2-201ENST00000475295 371 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 RPL7AP23-201ENST00000482625 776 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 OR5H7P-201ENST00000514084 930 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 RNA5SP34-201ENST00000516887 130 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC074050.1-201ENST00000563247 211 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AC004801.6-201ENST00000616571 978 ntBASIC6.51□□□□□ -1.37
RIF1Q5UIP0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms